| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcar_2310 |
|---|
| Symbol | rimK |
|---|
| ID | 3725002 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pelobacter carbinolicus DSM 2380 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007498 |
|---|
| Strand | + |
|---|
| Start bp | 2696867 |
|---|
| End bp | 2697772 |
|---|
| Gene Length | 906 bp |
|---|
| Protein Length | 301 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 637751911 |
|---|
| Product | ribosomal protein S6 modification protein |
|---|
| Protein accession | YP_357719 |
|---|
| Protein GI | 77919904 |
|---|
| COG category | [H] Coenzyme transport and metabolism
[J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0189] Glutathione synthase/Ribosomal protein S6 modification enzyme (glutaminyl transferase) |
|---|
| TIGRFAM ID | [TIGR00768] alpha-L-glutamate ligases, RimK family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 62 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAATCG GCATCTTATC GCGGAACCCC GAACTCTATT CCACCCGCAA GTTGTATGAA
GCCGCCATCA TCCGCGGGCA CCAGGCCAGG ATTATCGATC CGCTGCTTTG CTATATGACC
ATCGCCTCGC AACGCCCCAC CATTCACTAC AAGGGCGAGG AGTTGACCGG CTTCGACGCC
ATCATACCGC GCATCGGTGC CTCCATAACC TTTTATGGCA CAGCCGTGGT GCGCCAATTC
GAAATGATGA ACATCTACAG CGTCAACGAA TCGGTAGCCA TCAGCCGCTC GCGGGACAAA
CTGCGCAGCC TGCAGTTGTT GTCCCGCAAA GGCATCGGCC TGCCGCACAC CTGCTTCGCC
CATTCGACCA GATATACCAA GGACTTGATC AACCAGGTCG GCGGGGCTCC GCTGGTCGTT
AAGCTGCTGG AAGGCACGCA AGGGATCGGT GTCGTTCTGG CCGAAACGCA AAAAGCCGCC
GAAAGCGTCA TCGAAGCCTT CAAAGGCCTC AAAGAACAGA TCCTGGTCCA GGAGTTTATC
GAGGAATCCG GCGGCGCCGA CATCCGCTGT CTGGTGGTGG GAGGCAAAGT CGTCGCCGCC
ATGAAACGTC AGGGCGCCGA AGGCGAGTTC CGCTCCAACA TCCATCGCGG CGGCAAGGCC
ACAGTGGTCC GCCTGACCCC GGAAGAACGA GCCACCGCCG TACGCTCGGC CCATATCATG
GGGCTGAACG TGGCGGGGGT CGACATCCTG CAATCCAACC GCGGTCCCAT TGTCATGGAA
GTCAACTCTT CGCCAGGTCT CGAAGGCATC GAAACCGCCA CCGGCAAAGA TGTCGCTGAT
GAAATTATCC GCTTCATCGA AAAACATACC AAACCCGGCA GGACCAAAAC CCGTGGCAAG
GGTTGA
|
|---|
| Protein sequence | MKIGILSRNP ELYSTRKLYE AAIIRGHQAR IIDPLLCYMT IASQRPTIHY KGEELTGFDA
IIPRIGASIT FYGTAVVRQF EMMNIYSVNE SVAISRSRDK LRSLQLLSRK GIGLPHTCFA
HSTRYTKDLI NQVGGAPLVV KLLEGTQGIG VVLAETQKAA ESVIEAFKGL KEQILVQEFI
EESGGADIRC LVVGGKVVAA MKRQGAEGEF RSNIHRGGKA TVVRLTPEER ATAVRSAHIM
GLNVAGVDIL QSNRGPIVME VNSSPGLEGI ETATGKDVAD EIIRFIEKHT KPGRTKTRGK
G
|
|---|
| |