| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcar_2308 |
|---|
| Symbol | |
|---|
| ID | 3725000 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pelobacter carbinolicus DSM 2380 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007498 |
|---|
| Strand | + |
|---|
| Start bp | 2695050 |
|---|
| End bp | 2695880 |
|---|
| Gene Length | 831 bp |
|---|
| Protein Length | 276 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 637751909 |
|---|
| Product | putative amidotransferase |
|---|
| Protein accession | YP_357717 |
|---|
| Protein GI | 77919902 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0121] Predicted glutamine amidotransferase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 80 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTGCCAAT TACTCGGAAT GAACTGCAAT GTACCGACCG ATATCTGTTT TTCCTTTACC
GGTTTCCGAC AACGCGGCGG CTCCACCGAT GTGCATTCCG ATGGTTGGGG TATCGCATTT
TTCGAGGGCA AGGGCGTACG GCTATTTGTC GATCCGCAAG CCTCGGCCGA ATCGACCATC
GCTGAACTGG TGCGCAGCTA TCCCATCCAT TCCCTGAATG TGGTGGCCCA TATCCGTAAA
GCCACTCAAG GGGTGACCAG CCTGGAAAAC ACCCATCCGT TCATGCGTGA ATTGTGGGGG
CGCTACTGGC TGTTCGCTCA CAACGGCAAT CTGCCTCACT TCCAACCGCA GCTGGACGGC
AGTTATGTCC CGGTCGGCAA CACCGACAGC GAACAAACCT TCTGCTGGAT GCTGCAAAGC
CTGCGACAAC GCTTCGGCAC AGATGCACCA TCACGGCAGG AACTGTTTGA CGCCCTGGGC
GAACTGAGCC TGCCACTGGC CGGCATGGGA ATATTCAACT TTCTGCTATC CAACGGCGAT
TGTCTGGTGG CTCATTGCTC GACCGAGTTA AGCTACATCA TTCGGCGAGC ACCTTTTGCC
GAGGCGCATC TCAAAGATCA GGATATCAGC ATCGATTTCA GGCAGGTCAC AACTCCCGAG
GATCGGGTTG CGATCATCGC AACGCAACCT CTGACCGACA ACGAACCGTG GGTCAACATG
CGGCCGGGCA CCCTGTGGAT GTTCCATGAT GGCGAGGTGG TCGGCCAGCA AAACACGGTC
CCCAGCCCGT TCAAGTCATT GGCTGAAATG CTCGATACAG AGAGGACATG A
|
|---|
| Protein sequence | MCQLLGMNCN VPTDICFSFT GFRQRGGSTD VHSDGWGIAF FEGKGVRLFV DPQASAESTI
AELVRSYPIH SLNVVAHIRK ATQGVTSLEN THPFMRELWG RYWLFAHNGN LPHFQPQLDG
SYVPVGNTDS EQTFCWMLQS LRQRFGTDAP SRQELFDALG ELSLPLAGMG IFNFLLSNGD
CLVAHCSTEL SYIIRRAPFA EAHLKDQDIS IDFRQVTTPE DRVAIIATQP LTDNEPWVNM
RPGTLWMFHD GEVVGQQNTV PSPFKSLAEM LDTERT
|
|---|
| |