| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcar_2266 |
|---|
| Symbol | |
|---|
| ID | 3724958 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pelobacter carbinolicus DSM 2380 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007498 |
|---|
| Strand | - |
|---|
| Start bp | 2646511 |
|---|
| End bp | 2648004 |
|---|
| Gene Length | 1494 bp |
|---|
| Protein Length | 497 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | 637751867 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_357675 |
|---|
| Protein GI | 77919860 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG4461] Uncharacterized protein conserved in bacteria, putative lipoprotein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 56 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGAGTTTGG GTCAACGGGT TCTATTACTA TGCATAGCTC TCTCTTTCTC GATCACCTGC
GCATCAATGG CCGAAGGGCC TAGCTTCGAT TGTGAGAAGG CTGGAACGAA GATCGAGAAG
ATGATTTGCG CGGATGCGGA GCTTTCAAAA CTCGATGTCC GGATTGACGA GGCTTATGCT
GCAGCTTTGC AGGCGACCGA AGCCCCCGAG ACTTTAAAAC AGCAGCAGCG GCTGTGGTTA
AAAGCACGCA ACGCGTGCGA CGATGCTGCG GGCCTGAGCG AATCCTATAC CTCTCGGCTG
GCGCAGTTAG CAGCAGAGCC GGCGGATAAA AGTTGTCAGG CTGTTAAAGA TTACTGCAGC
GAAACAAAGA ACATCACCTC TAGGCTGATC TGTTCTGACC AGGAACTATC GGAAATGAAT
CGCTCCCTGG CACGCTCCTA TGCAAGGGCC TTGGAGCGGG TGAACGATTC GGCGACATTC
AAGCGTCAGC ACGAGGAGTG GCTTCAACGC ATATATTACT GTATGGGAGA TAGACCCTGC
GTCTGGCAGA GATACCGGAT GTACCTCTCC GCGCTTGACA CGTTTTTAAA GGTGGCTGAC
CAAACCGGAC AAGAGCCATC CGGCGCTTTA GCGAAAAAAA GATCGTTTGA GCCTCCAAGT
GTTGCGGCCT CTTCATCGGC AGAGACACCT GCGTACACGT TCAGGTTTGA AAAAGACACC
GACTGCACCG TATGCCGTGA TCTTCAGGCC AATTACCAGG AGCTAAACCC TGCTCAATCC
TCGTTTGCCT GCGAAATCCC TTTGAACCCC GCAAACCCTC AGTTCAGCTG GCCTCAGTGG
CAGGAAATGA TCGTCGAAGA TCATCTGGAT GTGATCTACA CAATTGAATC CCACCTTTTA
CATGACGACC TGCCGCCTTT CGAAATCTGG CGGTCACAAT ATTTGGCCGA CATGGCCAAG
GGTACCTCTA TGAGGCGGGC GGCCGGAGGT AAGCTTGTGC AAGCCTGCTT CAATCCCCGA
CTGCGGCAAA CCCAAGTTCG CTTTGAGTCC GATGGCCGTC TGGAAAAGGT ACTCGGCTAC
ACCCGGGATC GCTTTGGTGG CGAACGATGC AGAGAGTCTA TTACTGGATG CCCACTGCCT
GTTAATGGCA ACCTGGAAGC CTATCGCGCG TATTACCAAT GTAACGAGCA ATTGCAAAAA
GACTCTTGTG TCCGGATGGA TAGCCCCGGT GACCACATTG TTTTATTTGA ACCGACAATA
CGCCAAGTAC ATTTTGTCTT TCCAGGGGAT CAGGGGGCCG GTATGTCGAC TATCGCGGCC
GGACATCTGT TTCTCCATCA CAAAAAGGCA TATTTGGCTT TGGTTACAGT CTCGGGTATC
TCCGTAAGCC AGATTGAAAG ACTGGAGTTT GACAATCCAG CTATAAAGCC AACCAACCTT
GGGAGGCAGG TTTGCGATAT AATTTTTATT TTCCAAGATA AAACTATAAA ATAA
|
|---|
| Protein sequence | MSLGQRVLLL CIALSFSITC ASMAEGPSFD CEKAGTKIEK MICADAELSK LDVRIDEAYA
AALQATEAPE TLKQQQRLWL KARNACDDAA GLSESYTSRL AQLAAEPADK SCQAVKDYCS
ETKNITSRLI CSDQELSEMN RSLARSYARA LERVNDSATF KRQHEEWLQR IYYCMGDRPC
VWQRYRMYLS ALDTFLKVAD QTGQEPSGAL AKKRSFEPPS VAASSSAETP AYTFRFEKDT
DCTVCRDLQA NYQELNPAQS SFACEIPLNP ANPQFSWPQW QEMIVEDHLD VIYTIESHLL
HDDLPPFEIW RSQYLADMAK GTSMRRAAGG KLVQACFNPR LRQTQVRFES DGRLEKVLGY
TRDRFGGERC RESITGCPLP VNGNLEAYRA YYQCNEQLQK DSCVRMDSPG DHIVLFEPTI
RQVHFVFPGD QGAGMSTIAA GHLFLHHKKA YLALVTVSGI SVSQIERLEF DNPAIKPTNL
GRQVCDIIFI FQDKTIK
|
|---|
| |