| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcar_2247 |
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| Symbol | |
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| ID | 3724920 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pelobacter carbinolicus DSM 2380 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007498 |
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| Strand | - |
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| Start bp | 2623969 |
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| End bp | 2625363 |
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| Gene Length | 1395 bp |
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| Protein Length | 464 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 637751848 |
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| Product | Na+-driven multidrug efflux pump |
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| Protein accession | YP_357656 |
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| Protein GI | 77919841 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0534] Na+-driven multidrug efflux pump |
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| TIGRFAM ID | [TIGR00797] putative efflux protein, MATE family |
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Plasmid Coverage information |
| Num covering plasmid clones | 95 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACATTT TTCCGGTAGC GAAATCGCGA CTATGCGGAA TGAAGATCGA AAGTTTCGCT
CTGATGAAAC TGACGGGCCC CATTTTGACG GCACACCTTG CGCAACAGGC CCTTGCCTTT
ACGGATACGG TCATGGCCGG GCGGGTCGGT GCCACTGATC TGGCCGGCGT GGCGGTTGGG
GCCAGTTTGT GGATCCCTGT TTCGTTGTTC ATCTATGGGG TATTGTTGGC CGTGACGCCG
ATGGTCGCTC AAATGCATGG GGCAGGCCGA ACCACAGAGA CCGGCCCTTT GGTGCGTCGT
GGGCTATGGG TAGCCTTGCC GATGGTGGTT ATGGCTATGC TTATGTTACG TCATGCCGGC
GGGGTCTTTG TTCTTATGGA GGTGATTCCA CAGGTCGCTT CGATTGCATC AAATTATCTC
AAGGCGATAG CCTGGGGCTT GCCGGCTGCG GCGGTCTTTT TTTTATTGCG AAATCTCAGC
GAGGGAATGG GGTTGGCCCG GCCGAGCATG CTTATCGGTC TGGCGAGCCT GCCGATAAAT
GTTGCTGCAA ACTTTGTGTT TATCTATGGC AAACTCGGTT TTCCAGCGCT TGGCGGGGTT
GGTTGCGGGT GGGCCTCGAC TCTCACGTTG TGGTTTATGT GCGGATGTAT GTGTGCAACC
ATTTTATGGG GGCGGGGCTA CGCCGTTACG CATTGTTTTG ATTTTCGCCG GTCCTGTGGA
GAAGAAGGGG CCATGCATAT CCTGCGTCTC GGTTTCCCTA TCGGGTGTTC TTTGCTTGTG
GAGTCGAGTG TTTTCGCCCT GATTGCGCTT TTTCTTGCGC CGTTAGGGGC AAGCGTAGTG
GCTTCCCATC AGATCACCCT GAATTATTCG GCCACGGTCT TCATGATCCC ATTGAGTGTT
TCAAGCGCCA TTACCATCAG GGTGGGCCAT GCCGTCGGAT CGAGGGCTCG GGACCTGGCT
CGTCTGACGA CCAGGACCGG TTTACTGATG AATACGGTGA TTGCAATTAT GACCGCGGCT
TTTACGGTGT TTTTCGCTGA ACAGATTGCC TGTCTTTATA CCTTCGATCG CCAGGTTATT
GGCATGGTAG TGGGGTTGTT GTACCTCAAT GCCCTTTATC AGGTTTCCGA TGCGTTTCAG
GTTGGCGCCA TCGCCGCCTT AAGAGGTTAC AAAGACACCC GTGTTCCTTT GTTGCTGATA
CTGGTCGCAT TTTGGGGCAT TGCCATGCCT TTGGGGTACA GCCTTTCATT GACCTCTTTC
TGGGGAGCGC CCATGGGGGC CAAGGGATTC TGGATAAGTC TGGTCGTCGG GCTGAGTATT
TCAGCGGTGT TGCTGGGGGG ACGGTTGTGC CGGTTACAAC GCGGGATGGC AAGGATGGAG
AACGGCGGAG AATGA
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| Protein sequence | MNIFPVAKSR LCGMKIESFA LMKLTGPILT AHLAQQALAF TDTVMAGRVG ATDLAGVAVG
ASLWIPVSLF IYGVLLAVTP MVAQMHGAGR TTETGPLVRR GLWVALPMVV MAMLMLRHAG
GVFVLMEVIP QVASIASNYL KAIAWGLPAA AVFFLLRNLS EGMGLARPSM LIGLASLPIN
VAANFVFIYG KLGFPALGGV GCGWASTLTL WFMCGCMCAT ILWGRGYAVT HCFDFRRSCG
EEGAMHILRL GFPIGCSLLV ESSVFALIAL FLAPLGASVV ASHQITLNYS ATVFMIPLSV
SSAITIRVGH AVGSRARDLA RLTTRTGLLM NTVIAIMTAA FTVFFAEQIA CLYTFDRQVI
GMVVGLLYLN ALYQVSDAFQ VGAIAALRGY KDTRVPLLLI LVAFWGIAMP LGYSLSLTSF
WGAPMGAKGF WISLVVGLSI SAVLLGGRLC RLQRGMARME NGGE
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