| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcar_2244 |
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| Symbol | |
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| ID | 3724917 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pelobacter carbinolicus DSM 2380 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007498 |
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| Strand | + |
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| Start bp | 2618131 |
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| End bp | 2621223 |
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| Gene Length | 3093 bp |
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| Protein Length | 1030 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637751845 |
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| Product | AcrB/AcrD/AcrF cation/multidrug efflux pump |
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| Protein accession | YP_357653 |
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| Protein GI | 77919838 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0841] Cation/multidrug efflux pump |
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| TIGRFAM ID | [TIGR00915] The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family |
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Plasmid Coverage information |
| Num covering plasmid clones | 45 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAATTTA CCGACATCTT TATCCGCCGT CCGGTACTGG CCCTGGTGGT CAGCCTCCTC
ATCACCATAG CCGGCCTGCA GGCCATCCGC ACCCTCAACG TACGCCAGTA TCCCCGCAGC
GAAAACGCCG CCATCACGGT GACCACCGTC TATGTCGGAG CCAGCGCCGA TCTGGTGCGG
GGCTTTATCA CCACCCCCCT GGAGCGGGCC ATCGCCGCCG CCGACGGCAT CGATTACATC
GAGTCCCAGA GCGCCAAGGG AACCTCGACC ATCAAGGTAC GGCTAAAACT CAACTACGAT
TCGACCAAAG CCCTGGCCGA GATCAGCTCC AAGGTCGACC AGGTCCGCAA CGACCTGCCG
CCGGAAGCCG AGGTGCCGAT CCTCAATATC GAATCGGCCG ACAGCGAATT CGCCTCGGCC
TACCTGAGTT TTTCCTCCGA TGTGCTGCTG CAGAACGAGA TCACCGACTA CCTGATGCGT
GTGGTGCAAC CGCGGCTGTC GGCGGTCGAA GGGGTGCAAC GGGCCGAAAT CCTCGGCGCC
CGCACCTTCG CCATGCGCAT CTGGCTCAAA CCCGACCGCA TGGCGGCCTT TCATATCACG
CCGATGCAGG TCCGCGAGGC GCTGGCCGCC AACAACTACC TGTCGGCCGT GGGGCAGACC
AAGGGGGCAC TGATCCAGGT CAACCTGACC GCCGATACCA ATCTGCAGAC CGTCGAAGAA
TTCCGTCATC TGGTCATACA CCAGCAAGAC GATGCCATCG TGCGTCTGGC CGATATCGCC
GATGTGGTGC TGGGGGCCGA GGATTACGAC ACGGAAGTGC GGTTCTCGGG GCAAACCGCC
GTTTTTATGG GGATCTGGGC CCTGCCCAAC GCCAACTCTC TCGACGTCAT CCGTCGCATA
CGCGTCGAAA TGGAAAGCAT CCGCAAGGAT CTGCCGACGG GACTGGAGGG ACGGCTCGCT
TACGACGCCA CCGATTACAT CAACAACGCC ATCCACGAAG TCATTGAAAC CCTTGGCGAT
ACCCTGATCA TCGTTATCCT CGTAATTTTC CTGTTCCTGG GATCCATGAG GTCGGTGCTG
GTACCGGTCG TCGCCATCCC CCTGTCGCTG ATCGGCGCGG TCTTTTTGAT GCAAAGCTTC
GGCTTTACCG TCAACCTCCT CACCCTGCTC GCCATCGTTC TGTCGGTGGG GCTGGTGGTG
GACGATGCCA TCGTCGTGGT CGAAAACGTC GAACGGCACC TGCGGGAGGG GCAATCGCCG
ATGCAGGCGG CGATCCTCGG CGCCAGGGAA CTGGTCGGAC CGATCATCGC CATGACCATT
ACCCTGGCGG CGGTCTATGC CCCCATCGGC CTGCAGGGCG GATTGACCGG CGCCCTGTTC
CGCGAATTCG CCTTTACCCT GGCCGGAGCT GTCACCATCT CCGGTGTCGT GGCCCTGACC
CTGTCGCCGA TGATGTCCGC CCAGCTGCTG CGCCCCGACA TCGAGGAACA CGGCCTCGCG
GCCCGCATCG CCCGCACCTT CGAGCGCCTG CGTAACGGCT ACGCCCGCCT CCTCGACGCC
ACCCTGGCCA TGCGTCCGGC GGTCTATACG GTGTGGATCG TGGTGGGGCT GTTGAGCATC
CCCATGTACA TGATGTCGCC GGTGGAGTTG GCGCCGACCG AAGATCAGGG GGTCATTTTC
GGCATCCTCG ACGCGCCCGC CAACGCCACC CTCGACCAGA CCAGCCGCTA TGCGGCGGCG
GCCAACGACG TCTTTTTCAG TGCGCCGGAG ACCGAATTCA CCTTCCAGAT CACCAACCCC
TCCGCCGGCT TCGGCGGCAT GGTGACCAAA CCGTGGCAGC AACGGCAGCG CACGGTGTTT
CAGATCCTTC CGGAAATCCA CCAAAAACTG CAAGATATCC CCGGCATCCG CATGTTCCCC
GTCACGCCGC CGGCCCTGCC CGGAGGCGGG CAGTTCCCTG TGGAGTTCGT CATCGCCTCC
ACCGCCGACA CCGAGCGGAT CCTCGAGTTC ACCCAACAGT TGCAACTCAA GGCGATACAG
AGCGGCATGT TTGCCTTTCC GCCCCTCATC GACGTCAAGA TCGACAAACC GGAAACCGAA
TTCATCATCG ATCGCGACAA GGTGGCGATG CTCGGCCTCG ACCTGTCCCA GGTGGGCGCC
GATCTCGGCG CCATGGTCGG CGGCAATTTC GTCAACCGCT TCGATATCTC GGGACGCAGC
TACAAGGTCA TCCCGCAAAT CGAGCGCAGC GGACGCCTTA CTCCCGAGCA ATTGCAGAAT
ATCTACGTAA CAGGTCCCGA CGGCCAGCTG GTCCCCTTAA GCACCGTTGC GAGCCTGCGC
GACAGCACGG TACCCCGCTC CCTGAACCGG TTTCAGCAAC TCAACGCGGT CAAACTCAGC
GGCGTCTCCG TACGCCCCCT GGACGAAGCG CTGACCTTCC TCGAAACCGA GGCGGCCAAA
ATCCTGCCGG ACGGCTACTC GATCGATTAC ACAGGCGAAT CGCGCCAGCT TCGAACCGAA
GGCAACCGGT TTCTACCCGC ATTCAGCCTG GCAGTCATCC TCATCTTCCT GGTGCTCGCG
GCCCAGTTCA ACAGCTTCCG CGACCCCTTC GTCATCCTGT TCGGATCGGT GCCGCTGGCC
ATGTTCGGCG CCATGATCTT CACCTTTTTG AAAATGCCCG ATCCGAACGT CCCTTTCTGG
ACCAACGGCT GGACCACCAC TCTCAACATC TACTCCCAGG TCGGGCTGGT TACCCTGGTC
GGCCTGGTAG CCAAAAACGG CATCCTCATC GTCGAATTCG CCAATCAGCT GCAACTGCAG
GGACACAGCA AACTCGAAGC GGTACGTGGA GCCTCTCTTA CCCGTCTGCG GCCGATCCTG
ATGACGTCCG TTGCCACCAT CGCCGGCCAT TTCCCCCTGA CCCTGGTCAC CGGCGCCGGC
GCCGCCGCCC GTAACTCCAT CGGCCTGGTA CTGGTGGGAG GCATGTTCGT CGGCACGATT
TTCACCCTGT TCATCGTTCC GTCCATTTAC ATGCTGGTAG CCCGCGACCA TGCCAGGGAT
ATCAAGCGCC GCGAAGCGAT GGCGAAAGTA TAA
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| Protein sequence | MKFTDIFIRR PVLALVVSLL ITIAGLQAIR TLNVRQYPRS ENAAITVTTV YVGASADLVR
GFITTPLERA IAAADGIDYI ESQSAKGTST IKVRLKLNYD STKALAEISS KVDQVRNDLP
PEAEVPILNI ESADSEFASA YLSFSSDVLL QNEITDYLMR VVQPRLSAVE GVQRAEILGA
RTFAMRIWLK PDRMAAFHIT PMQVREALAA NNYLSAVGQT KGALIQVNLT ADTNLQTVEE
FRHLVIHQQD DAIVRLADIA DVVLGAEDYD TEVRFSGQTA VFMGIWALPN ANSLDVIRRI
RVEMESIRKD LPTGLEGRLA YDATDYINNA IHEVIETLGD TLIIVILVIF LFLGSMRSVL
VPVVAIPLSL IGAVFLMQSF GFTVNLLTLL AIVLSVGLVV DDAIVVVENV ERHLREGQSP
MQAAILGARE LVGPIIAMTI TLAAVYAPIG LQGGLTGALF REFAFTLAGA VTISGVVALT
LSPMMSAQLL RPDIEEHGLA ARIARTFERL RNGYARLLDA TLAMRPAVYT VWIVVGLLSI
PMYMMSPVEL APTEDQGVIF GILDAPANAT LDQTSRYAAA ANDVFFSAPE TEFTFQITNP
SAGFGGMVTK PWQQRQRTVF QILPEIHQKL QDIPGIRMFP VTPPALPGGG QFPVEFVIAS
TADTERILEF TQQLQLKAIQ SGMFAFPPLI DVKIDKPETE FIIDRDKVAM LGLDLSQVGA
DLGAMVGGNF VNRFDISGRS YKVIPQIERS GRLTPEQLQN IYVTGPDGQL VPLSTVASLR
DSTVPRSLNR FQQLNAVKLS GVSVRPLDEA LTFLETEAAK ILPDGYSIDY TGESRQLRTE
GNRFLPAFSL AVILIFLVLA AQFNSFRDPF VILFGSVPLA MFGAMIFTFL KMPDPNVPFW
TNGWTTTLNI YSQVGLVTLV GLVAKNGILI VEFANQLQLQ GHSKLEAVRG ASLTRLRPIL
MTSVATIAGH FPLTLVTGAG AAARNSIGLV LVGGMFVGTI FTLFIVPSIY MLVARDHARD
IKRREAMAKV
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