| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcar_2222 |
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| Symbol | |
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| ID | 3724934 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pelobacter carbinolicus DSM 2380 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007498 |
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| Strand | - |
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| Start bp | 2594705 |
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| End bp | 2595232 |
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| Gene Length | 528 bp |
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| Protein Length | 175 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 637751823 |
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| Product | 16S rRNA processing protein |
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| Protein accession | YP_357631 |
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| Protein GI | 77919816 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0806] RimM protein, required for 16S rRNA processing |
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| TIGRFAM ID | [TIGR02273] 16S rRNA processing protein RimM |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 6.646e-18 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGTTCTGC AACAAAGCGA TTTGCTGATT CTAGGGGTTG TTATCGGAAC CCACGGGTTG
CGTGGCGACC TCAAGATCCG CGGTAGTGAC CAGGATTTTC CCTTGTTGTC CAAGATGCAC
CAGCTTGTCT TTCTGCGTGA AGGCGAGACG GTGCTGAAGT GCGCCCGTCG CAAGGCCGGC
TGGTACAAGG GGCATCTTCT GTTGCAGATT GCCGGTTATA GAGATGTTCG TGCCGTTCAA
CATCTTGTTG GATGCGAGGT TGCCGTTCGT CGAGATGATG TTCCCGGGTT GCCTGCAGGT
GAATACTACT GGTTTCAGCT TAAGGGCATG ACCGCCGTTG ACCGTCGGTT GGGTGCCCTC
GGTTGCCTTG AGGATATTTT CACCACTGCG GCCCATGACA TCTACGTGAT TAACGGGGAC
TATGGCGAGG TTTTAGTGCC AGCCGTCAAG GCCTTTATTG CGGATGTCGA TCTGGAGAGC
AACCGTATAT TGTTTGATCT GCCTGATGGG CTGGTTCAGG AAACCTGA
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| Protein sequence | MVLQQSDLLI LGVVIGTHGL RGDLKIRGSD QDFPLLSKMH QLVFLREGET VLKCARRKAG
WYKGHLLLQI AGYRDVRAVQ HLVGCEVAVR RDDVPGLPAG EYYWFQLKGM TAVDRRLGAL
GCLEDIFTTA AHDIYVINGD YGEVLVPAVK AFIADVDLES NRILFDLPDG LVQET
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