Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pcar_2181 |
Symbol | |
ID | 3724873 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pelobacter carbinolicus DSM 2380 |
Kingdom | Bacteria |
Replicon accession | NC_007498 |
Strand | + |
Start bp | 2546563 |
End bp | 2547771 |
Gene Length | 1209 bp |
Protein Length | 402 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 637751782 |
Product | putative antibiotic transporter |
Protein accession | YP_357590 |
Protein GI | 77919775 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2814] Arabinose efflux permease |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 46 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAACACCG TACCTGTAAA AAAAGATGCT TTGTGGACAA AGCCCTTCAC CCTGACGCTG CTGGCTTCTT TTCTGATCTT CATACCGTAT TCGCTTTACC TGCCCGTCCT GCCGGTTTAC GTCATAGATA AACTCCACGG CTCCCTGGCT GCTGCGGGAT TGGTTAACGC CTTTTTCCTG CTTGCTTCGG TTTTGTTCCG TGCCCAGACA AGCCGTCTTG AAAACAGATT CGGGGTTCGC TTCGTCCTGC TTGCCAGCGG ATTTTTGTTC ATGCTTTCCA ACTGCCTGTT TCTTCTAACG GACAGCACGA CAGTCATCCT GGCCATTCGA TTTTTCAGCG GGGCATGCTT TGCCGTCGTC AACACCTGCA TACAGGCTCT GGGCAGCCGC ATCGCGCCGT TAAAACGCAA AGGCGAGGGC CTTGGGTACC TGACCATGGT GGTAACCGCA GGCAGCGCCA TCGGGCCCTA TGTCGGCTTG AAGCTGGCCA AAGCATACGG CTTCGACTGG GTTTTTATTT TCTGCATCAT CGTTGTACTT GTCGGTTTTA TTCTATCCAT GATGATCAGT ATTGAAGAAG CGCCCCCCGT TGCATCGCAA CCAAAAGGCT TTCAGGCTTT GAAGGATCTC ATCGAAACGC GTGCAGTACC CGCTTCGAGC ATCGTCCTTT TACTGTCTTT CGCCTACGCC GCCGTCATTA CCTTTGTGAC CGTTTACGCA ACCCAGCTAC AATTACCTGC CGCCTCGACT TATTTCTTTG TCGTTCTGGC AACCTGCTCC ATCGGATCGC GACTGTTCGC AGGACATATT TATGACCGTT TCGGTGCCGA TGTCATCATC TACCCGTCCT TTGCCATCCT GGCGCTGGGC TTGGCTATTC TGGGTTGTGC CGCAACCTCG CTCCATATAC TTGCAGCCGC AGCCCTGATC GGCTTTGCCT ACGGTGCAGC CGTGCCCGGA CTGCTTACCC TGGCGATTCA AAAGTCCCCG GCGCATAGAA CCAGCGCTGT GACGGCTACG TATTTCACCT TTTTAGACTC CGGGCTGGGC ATCGGCTCCT ATCTTGTGGG GGTGTTCATT CCGCTGCTTG GCTACGCCCG TCTCTACCTG CTTCTAAGCC CGTTGATGCT GGCCGTCGTA TTGCTTTATT ACAAATTGAT CACCCGGAAA TTCGGCACTA CGGCGATCAG TGCATCATCG ATCCGGTAA
|
Protein sequence | MNTVPVKKDA LWTKPFTLTL LASFLIFIPY SLYLPVLPVY VIDKLHGSLA AAGLVNAFFL LASVLFRAQT SRLENRFGVR FVLLASGFLF MLSNCLFLLT DSTTVILAIR FFSGACFAVV NTCIQALGSR IAPLKRKGEG LGYLTMVVTA GSAIGPYVGL KLAKAYGFDW VFIFCIIVVL VGFILSMMIS IEEAPPVASQ PKGFQALKDL IETRAVPASS IVLLLSFAYA AVITFVTVYA TQLQLPAAST YFFVVLATCS IGSRLFAGHI YDRFGADVII YPSFAILALG LAILGCAATS LHILAAAALI GFAYGAAVPG LLTLAIQKSP AHRTSAVTAT YFTFLDSGLG IGSYLVGVFI PLLGYARLYL LLSPLMLAVV LLYYKLITRK FGTTAISASS IR
|
| |