Gene Pcar_2181 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPcar_2181 
Symbol 
ID3724873 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePelobacter carbinolicus DSM 2380 
KingdomBacteria 
Replicon accessionNC_007498 
Strand
Start bp2546563 
End bp2547771 
Gene Length1209 bp 
Protein Length402 aa 
Translation table11 
GC content53% 
IMG OID637751782 
Productputative antibiotic transporter 
Protein accessionYP_357590 
Protein GI77919775 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2814] Arabinose efflux permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones46 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACACCG TACCTGTAAA AAAAGATGCT TTGTGGACAA AGCCCTTCAC CCTGACGCTG 
CTGGCTTCTT TTCTGATCTT CATACCGTAT TCGCTTTACC TGCCCGTCCT GCCGGTTTAC
GTCATAGATA AACTCCACGG CTCCCTGGCT GCTGCGGGAT TGGTTAACGC CTTTTTCCTG
CTTGCTTCGG TTTTGTTCCG TGCCCAGACA AGCCGTCTTG AAAACAGATT CGGGGTTCGC
TTCGTCCTGC TTGCCAGCGG ATTTTTGTTC ATGCTTTCCA ACTGCCTGTT TCTTCTAACG
GACAGCACGA CAGTCATCCT GGCCATTCGA TTTTTCAGCG GGGCATGCTT TGCCGTCGTC
AACACCTGCA TACAGGCTCT GGGCAGCCGC ATCGCGCCGT TAAAACGCAA AGGCGAGGGC
CTTGGGTACC TGACCATGGT GGTAACCGCA GGCAGCGCCA TCGGGCCCTA TGTCGGCTTG
AAGCTGGCCA AAGCATACGG CTTCGACTGG GTTTTTATTT TCTGCATCAT CGTTGTACTT
GTCGGTTTTA TTCTATCCAT GATGATCAGT ATTGAAGAAG CGCCCCCCGT TGCATCGCAA
CCAAAAGGCT TTCAGGCTTT GAAGGATCTC ATCGAAACGC GTGCAGTACC CGCTTCGAGC
ATCGTCCTTT TACTGTCTTT CGCCTACGCC GCCGTCATTA CCTTTGTGAC CGTTTACGCA
ACCCAGCTAC AATTACCTGC CGCCTCGACT TATTTCTTTG TCGTTCTGGC AACCTGCTCC
ATCGGATCGC GACTGTTCGC AGGACATATT TATGACCGTT TCGGTGCCGA TGTCATCATC
TACCCGTCCT TTGCCATCCT GGCGCTGGGC TTGGCTATTC TGGGTTGTGC CGCAACCTCG
CTCCATATAC TTGCAGCCGC AGCCCTGATC GGCTTTGCCT ACGGTGCAGC CGTGCCCGGA
CTGCTTACCC TGGCGATTCA AAAGTCCCCG GCGCATAGAA CCAGCGCTGT GACGGCTACG
TATTTCACCT TTTTAGACTC CGGGCTGGGC ATCGGCTCCT ATCTTGTGGG GGTGTTCATT
CCGCTGCTTG GCTACGCCCG TCTCTACCTG CTTCTAAGCC CGTTGATGCT GGCCGTCGTA
TTGCTTTATT ACAAATTGAT CACCCGGAAA TTCGGCACTA CGGCGATCAG TGCATCATCG
ATCCGGTAA
 
Protein sequence
MNTVPVKKDA LWTKPFTLTL LASFLIFIPY SLYLPVLPVY VIDKLHGSLA AAGLVNAFFL 
LASVLFRAQT SRLENRFGVR FVLLASGFLF MLSNCLFLLT DSTTVILAIR FFSGACFAVV
NTCIQALGSR IAPLKRKGEG LGYLTMVVTA GSAIGPYVGL KLAKAYGFDW VFIFCIIVVL
VGFILSMMIS IEEAPPVASQ PKGFQALKDL IETRAVPASS IVLLLSFAYA AVITFVTVYA
TQLQLPAAST YFFVVLATCS IGSRLFAGHI YDRFGADVII YPSFAILALG LAILGCAATS
LHILAAAALI GFAYGAAVPG LLTLAIQKSP AHRTSAVTAT YFTFLDSGLG IGSYLVGVFI
PLLGYARLYL LLSPLMLAVV LLYYKLITRK FGTTAISASS IR