Gene Pcar_2174 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPcar_2174 
SymbolaroL 
ID3724866 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePelobacter carbinolicus DSM 2380 
KingdomBacteria 
Replicon accessionNC_007498 
Strand
Start bp2538570 
End bp2539088 
Gene Length519 bp 
Protein Length172 aa 
Translation table11 
GC content59% 
IMG OID637751775 
Productshikimate kinase II 
Protein accessionYP_357583 
Protein GI77919768 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0703] Shikimate kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones97 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACTCAAA CCATTTTCAT GGTCGGTGCC CGTGCGGCAG GAAAAACAAC GATTGGACAA 
GCCCTGGCAA ACGCATTGAG TTACCCCTTT GTAGATACGG ACCTGTACAT GCTGGAAACG
ACCAATCTGA CGGTGGCCGA TGTCGTGGTC ACGGAGGGAT GGGAAGGTTT CCGGCGCCGG
GAGAGTGAAG CGTTGCGTAC CGTAACCAAG CCTGGCATCG TCGTCGCGAC CGGCGGCGGG
ATGGTCCTGT CCGAGGAAAA TCGTGACTTC ATGCGCGCCA ACGGTACGGT TTTTTACCTT
TCCGCACCGG CAGAAGTTCT GGCCGCCCGT CTCGAAGCCT ATCCCGATGC CGGCCAGCGG
CCGACCCTTA CCGGGCGCCC CATTGTTGAA GAGGTGAGCG AAGTTCTGGC TGCCCGCGAA
AATCTCTATC GCAGTGCCGC GCATCATGTC CTGGATGCTT CCGTCGCTCC GGAAGCCGTA
CTGGTCCAGG CGCTGGAGCT TTTGAAAAAA CAGGCCTAG
 
Protein sequence
MTQTIFMVGA RAAGKTTIGQ ALANALSYPF VDTDLYMLET TNLTVADVVV TEGWEGFRRR 
ESEALRTVTK PGIVVATGGG MVLSEENRDF MRANGTVFYL SAPAEVLAAR LEAYPDAGQR
PTLTGRPIVE EVSEVLAARE NLYRSAAHHV LDASVAPEAV LVQALELLKK QA