Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pcar_2166 |
Symbol | |
ID | 3724858 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pelobacter carbinolicus DSM 2380 |
Kingdom | Bacteria |
Replicon accession | NC_007498 |
Strand | - |
Start bp | 2526730 |
End bp | 2527404 |
Gene Length | 675 bp |
Protein Length | 224 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 637751767 |
Product | outer membrane protein |
Protein accession | YP_357575 |
Protein GI | 77919760 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG2885] Outer membrane protein and related peptidoglycan-associated (lipo)proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.00000000706819 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAAGAT TTTTGACTGT TGTTGCGGTG CTTTCCCTGG TTGCTGCCGG TTGCAGCCAG CCCATGACGC GGACCCAGAA AGGCACGGCC ATCGGCGCGG GGGCTGGTGC GGCCGTAGGC GCAGGATTGG GACAACTCAT CGGCGGTGAT ACCGAGGGTA CTCTTATCGG TGCCGGTATC GGTGCCGCGT TGGGAGGGAC GGTAGGCGGT TTCTATGCCA ATTATATGGA AAAGCAGGAA CAGGCCATGC GGCAGCAATT GGCCGGGGTC GAAGGGGCCA GTATTCAACG TGATGCCGAA GTGCTGGCGG TGACGTTCAA GTCCGACGTG CTGTTCGATG TCAATTCCTA TTCCGTCAAA TCCGGCGGTT ACGACGAGTT GCAGCGAGTT GCCGGGGTGC TCAACAATTA TCCCCAGACC AGCATCCAGA TTGCCGGACA TACCGACAGC ACCGGCTCCG AGCAATACAA TATGCAGTTG TCCCGGCAGC GCGCCGAGGC GGTTAAGAAT GTGCTGGTCG GTTATGGGGT GGCACCCGCT CGCCTGATGA CCGTCGGCTA CGGCGAAAGC AAGCCCATTG CCAGCAATGC CAACGAGGCC GGTCGTCAGA TCAACCGACG TGTGGCTATC ACCATTACGC CGAATCAGCA GCAGATGTCC ACCCAGCCTT ACTGA
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Protein sequence | MKRFLTVVAV LSLVAAGCSQ PMTRTQKGTA IGAGAGAAVG AGLGQLIGGD TEGTLIGAGI GAALGGTVGG FYANYMEKQE QAMRQQLAGV EGASIQRDAE VLAVTFKSDV LFDVNSYSVK SGGYDELQRV AGVLNNYPQT SIQIAGHTDS TGSEQYNMQL SRQRAEAVKN VLVGYGVAPA RLMTVGYGES KPIASNANEA GRQINRRVAI TITPNQQQMS TQPY
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