Gene Pcar_2161 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPcar_2161 
Symbol 
ID3724853 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePelobacter carbinolicus DSM 2380 
KingdomBacteria 
Replicon accessionNC_007498 
Strand
Start bp2518935 
End bp2520380 
Gene Length1446 bp 
Protein Length481 aa 
Translation table11 
GC content49% 
IMG OID637751762 
Producttwo component sensor histidine kinase 
Protein accessionYP_357570 
Protein GI77919755 
COG category[T] Signal transduction mechanisms 
COG ID[COG4191] Signal transduction histidine kinase regulating C4-dicarboxylate transport system 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value6.37303e-16 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGGAGGGT TCCTTCTTCT ACGTCTCGGT GAAAAGGAAC TTATCGATCA AAGGGTTGCC 
ATCTTTCAAA CCGTTTTGGA GACGATGACT AACCTATCTT CACGGGATGG TGTAAGTGCA
CGTCCTTTTA ATATTCAATT GAATGAAATG TTTCATCGGA CCGGTTCTTT ACTGGGAGTA
GCCAGCGCCG AACTGTGGTT ACAAAAAGGA AACATGTTGG AGCGCGTTGC ATCCAGTGAT
AAGAAGGATG TTTTTGCTTC TCGCTCAAAC CGTCGCTGGA ATCCCGAAGT TATCACAGAA
ACTCGTTCCA TGGTCATGTA TCCTCCCCTG TGGCCGGCGG GCAAAAACCG TAGCGATTTT
TTGGCAAAAA TCGAAGTTCC CATTCGTTTT AACGGACAAG CGGTTGGCGT TTTGCAAAGT
TGGTTGTCTC TGCGGGAAAT CAGGGACCAA TTGCAGGGAG CCCGTCGCAT GGTCATATTA
TACGCATTTC TCTACGGCAT GGTGGTGCTT ATTTTTGGTA TATACCTTTT GAATCGCCAT
GTGGTGCGTC CTACCGCCCG CCTTCTAACT TCGACCATGG CCATTGCCGC CGGAAATCTG
GAGCAACACG TTCCAGAAGC AGGACCCCGG GAAATTGCTT CTTTGGCCAA GGCGTACAAT
GGGATGGTCG AAACTTTAAA AAATAGCCGC AAAAAAACGG ATGAATACAT ATTGTCCTTA
CAACAGGTCA ATGGCGAACT TAAAAAAACC CGGGATGAGT TAATCCATAC GGCGCGGATG
GCCACGGTCG GCCATTTGGC GGCGGGATTG GCCCATGAAA TAGGGAATCC CTTAACCGCT
ATTATTGGCT ATCTTTCCTT GCTAAAAGCA GAATTACGCT CCGGGCCTCA AACCGGACTG
GTTGAAAGAG CTTCCGGCGA AGCAAACCGG ATAGATCGAT TGGTAAGGGA TTTGCTCGAC
TTTGCATCAC CGGCTTCTAC AACGGCAGAG TTGTTTGATC CGATAAGAGT GTTCGAAGAA
GCTATCGATA TTCTGACTCA TCAGGGTAAG ATTTCCGGGG AAATGATTCA AAACGATTTA
CCACCGGTTC TTGCACCGGT GCATATGGTT CGTCACCGTC TATTGCAGGT GTTTATTAAT
TTGGTCTCAA ATTCACGGGA TGCTCTTGTC GGCCCCGGGA CGATCCGATT GTCCGCTGGT
GTTTTGGAGG GGTGGGTATC CTTGAATGTT GCCGATAATG GGATCGGTAT CGAAGAGGAG
AGCCTTCAAC ACATTTTCGA CCCATTTTTT ACGACCAAAG AACCCGGCAA AGGGAGGGGG
CTGGGACTTG CGGTTTGTTA TCGGGTTATC AGAGAGGCCG GTGGTTATAT TGAAGTCGTT
TCCGATAAGG GGAGGGGGAC CGAGTTCACC GTTCGGCTTC CCATCATTCC GAACAGAGGG
TTGTAA
 
Protein sequence
MGGFLLLRLG EKELIDQRVA IFQTVLETMT NLSSRDGVSA RPFNIQLNEM FHRTGSLLGV 
ASAELWLQKG NMLERVASSD KKDVFASRSN RRWNPEVITE TRSMVMYPPL WPAGKNRSDF
LAKIEVPIRF NGQAVGVLQS WLSLREIRDQ LQGARRMVIL YAFLYGMVVL IFGIYLLNRH
VVRPTARLLT STMAIAAGNL EQHVPEAGPR EIASLAKAYN GMVETLKNSR KKTDEYILSL
QQVNGELKKT RDELIHTARM ATVGHLAAGL AHEIGNPLTA IIGYLSLLKA ELRSGPQTGL
VERASGEANR IDRLVRDLLD FASPASTTAE LFDPIRVFEE AIDILTHQGK ISGEMIQNDL
PPVLAPVHMV RHRLLQVFIN LVSNSRDALV GPGTIRLSAG VLEGWVSLNV ADNGIGIEEE
SLQHIFDPFF TTKEPGKGRG LGLAVCYRVI REAGGYIEVV SDKGRGTEFT VRLPIIPNRG
L