| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcar_2159 |
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| Symbol | |
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| ID | 3724851 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pelobacter carbinolicus DSM 2380 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007498 |
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| Strand | - |
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| Start bp | 2516846 |
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| End bp | 2517466 |
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| Gene Length | 621 bp |
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| Protein Length | 206 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 637751760 |
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| Product | Tfp pilus assembly protein FimT |
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| Protein accession | YP_357568 |
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| Protein GI | 77919753 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4970] Tfp pilus assembly protein FimT |
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| TIGRFAM ID | [TIGR02532] prepilin-type N-terminal cleavage/methylation domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 0.000106195 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGATTTTG GAGAAGATAA TATGCAGTAC AAGCTTACCG GAGGCAGCAT GGCTATACGA
AATGTTTCAC CCAGCTCAAG GGACAGAGGT TTATGCAGGG CCGGCTTTAC CCTCATTGAG
CTCATCGTAA CCATTGTTGT GGCAGGTATT TTGTTGGCTA TTGCCGTGCC TGCTTTCAGG
GGATTAGTTC TCTCAAACAG GCTCATGACA CAGACCAACG AAGTGGTTAG GACTTTGAAT
CTGACTCGTC AGGAAGCGAT TAAGCGCGGT GTCAGGGTGA CCATTTGTCC GAGCAACGAT
GGAGCGACTT GTAGCGGTGC AGGGACCTGG GAACAGGGTT GGATCGTTTT TAACGATCCA
AACGCCAATG CCGCTCCGGA TGCCGCCGAG ACCATTTTGT TCGTCAATAA CGGTTTGGGC
GGTCTTGTGA CGCTGCGTAC CGGGGCCAAT TTTACAAATT CCCTCAGTTA CTTGCCCAAC
GGCATCAGCC GCGGGGGAGG AGGGCTTCCG AACGATACCT TTCGTATGTG CGATCAGCGG
GGTACCGCCA ATGCTTTTTC TATTGTCATA AATTCTGTCG GTCGCGTTAG AGCCGACCGG
GGAGCTGCCC AATGTCCATG A
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| Protein sequence | MDFGEDNMQY KLTGGSMAIR NVSPSSRDRG LCRAGFTLIE LIVTIVVAGI LLAIAVPAFR
GLVLSNRLMT QTNEVVRTLN LTRQEAIKRG VRVTICPSND GATCSGAGTW EQGWIVFNDP
NANAAPDAAE TILFVNNGLG GLVTLRTGAN FTNSLSYLPN GISRGGGGLP NDTFRMCDQR
GTANAFSIVI NSVGRVRADR GAAQCP
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