| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcar_2155 |
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| Symbol | pilY1 |
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| ID | 3724847 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pelobacter carbinolicus DSM 2380 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007498 |
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| Strand | - |
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| Start bp | 2509878 |
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| End bp | 2514623 |
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| Gene Length | 4746 bp |
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| Protein Length | 1581 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 637751756 |
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| Product | Tfp pilus assembly protein, tip-associated adhesin PilY1 |
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| Protein accession | YP_357564 |
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| Protein GI | 77919749 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3419] Tfp pilus assembly protein, tip-associated adhesin PilY1 |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.197712 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACAACGT CTGCCGTTGC CGGTGAGGTT GCCCAGTCCC CCCTGTTTTT GACCCAGGAG
GTTCCTCCCC TGAATCTGAT TGTTATGGGG CGGGATCATA AGCTGTATTA CGAAGCCTAC
AACGATGCAT CGGATCTCAA TAACGATGGT AAATTGGATA TCCGCTACGA TCCCGCCATC
GAATATTTCG GTTATTTTGA TTCTTACAAG TGTTACGAAT ATGATGGCTC GGCGAGTCCC
GCAAGGTTTG ACCCCAGCAG TGTCTCTGCC GATAAAACCT GCTCCGGATC GAATGAGTGG
AGCGGAGATT TCCTCAATTA TCTGACCACC GCCCGCATCG ATGCTCTGCG AAAAGTTCTT
TATGGCGGTT ATCGCTCGGT TGATACCGCC ACTGAAACAG TCCTGGAGCG TTCGCATGTC
CCCCAGGATG CCCACAGTTG GGGGAAGGAA TACGCCAGTG TTGCCGTCGA TGGTTATGAT
ATTCAGGATT ATACACCCCT GGCTCTGCCG GATAGCGGTA ATCGTCATTT GTTCGGCAAT
ACGACTCTGC GTGCCGATGA TACTATTCCG CGACTGAGGG TTCTCCCAAA CAGCAGCCAT
CGCATCTGGG AGTGGGTTTC CAAGGAACAG CCAGTTCTCG ATAGTAGTCT CGAATCGTCA
GGTACCAGTT ATACGGGTTA TCCCGCGAGC CATTCGGCTT ATGAAGATCT GGTGAATCAA
TTTGCTACTG CGAGTCATTT GCAGGGATCT CAATCGGTTT CCTTGATCGA TGGTAGTGGA
AACCCCTTTG GTTCCGATGA TTATTACCTT ACGGTTTTTA AGGGTTACCT GGTCGTATCT
ACGGCGGGAA CCTATTCTTT TTCGGTTAAC GGGGACGATG CGGTAGAAGT CCTTGTCGAT
GGCACGGTGG TGACCGGATG GTATAGTGGA CACGGTGCCT CTTCCACTGT GCCCCCTTCC
GGTGTCGGCA CGATATCCCT GGGTAGTGGC AACCACAAAG TGGAATTTCG TCACCAGGAA
GCTTCCGGCT CGGACAGCTA TGAGCTATGG TGGTCCGGAC CCGATTCCGG AAGTTCATGG
CAAATTGTAC CTGCCGCATC CTATTCCGGG TTAATTCAAT CGGTATATGA TGTGAGCACC
AGCAACTCCG TCATCACAGA CTATGCCGTG CGGGTAGAGG TGTGTAAAAG CGGCATGTTA
GAAAGTAATT GCCGCCAATA TACCGATGCA AGCAGTGTCG ACCATTACAA ACCTGCAGGA
TTGTTGCAGG AGTATGGTGA AGACGATCAA ATGTTGTTCG GTCTGTTGAC GGGATCCTAT
ACAAAAAACA CCTCTGGTGG TGTGTTGCGC AAAAAAATGG GGAGTTTCTC CGATGAGGTT
GATGCCGAAA CCGGTCAATT CACCTCGGTT AATGGCATTG TCAAGACCAT CGATAAGCTG
AGAACCATCG GATTTTCTAC CGGATATACT TATAATCAAA ATTGCGGATG GATCACTACT
CGCCCCATCA ACGATGGCGA ATGTCGGATG TGGGGGAATC CTATTGCCGA GATGATGTAT
GAAGGCGTGC GATATTTTTC CGGCAAAGGC AGTCCGACCT CCGCGTTTGA TATTGCTTCC
AGCGGCAACG ATGATGCTAC CTTGGGCTTG CCTTTGGCGA GTTGGGACGA TCCCTTTGCC
GAGGGAAATA ATGAATATTG TGCAAAACCT TTCCAGCTTA TTATTAGTGA TATCAACCCC
TCCTATGACA CCGGACAATT GCCCGGGAGT TATTTTAACT CTTTTTCCGG TGATGTCAGT
GATCTCGACG TCGATTCTCT GGGGCAAAAG ATATGGGGTC ATGAATACGG CTCGGATCAA
AAGATTTTTA TTGGGCAATC GGGTTCGGTG TATGATGGGG CGCCGACTCC GAAAGCGGCC
GAAAGCTTCG GTTCCGTGCG CGGCCTTGCT CCGGAAGAAC CGACTAAGCA CGGTGGATAT
TATGCCGGAA GTATCAGCCT ATTCGCCAAT CAAAATGACA TCAGCGATGC CGAGGAAGAG
CAGAAGATGA CTACCTTTGC CGTGGCTCTT GCGTCGCCTT TGCCCCAGAT CAAGATTCCG
GTGGGTGATA GTACGATAAC CTTGGTCCCT TTTGCCAAAT CGGTAGGAGG GTATTCGATA
AACGCGACTC AAGGATCGTT CCAACCGACC AACTCCATCG TCGATTTTTA TGTCGAAAGC
CTGTCGTCAA CGTCGGGAAA ATTCCGTATC AATTTTGAAG ACGTTGAACA GGGTGCTGAC
CATGATATGG ATGCGATAGT CGAATACACC TATGAAGTTA TCGATAGCGA TACGGTAAAA
ATAAATGTGG AATCGACATA TGCCGCTGGG TCGATTATTC AGCACATGGG ATATGTTATA
TCCGGGACTA CAGCGGACGG GACATATCTC GAAGTGCGGG ATGTGGATAC CACTGAAGCT
TCCGATCCTG ACTATTTTCT CGACACTCCT CCCGGGGGGA CTATCGGTGT TGACTGGGAC
GATGATAAAC CGTTGCCCCT TACGGCAAGC CGTTCCTTTA AGGTTTCGGG GAATAATTCC
GCTTTTTTCC TGAAAAACCC ACTGTGGTAC GCTGCGAAAT ACGGGAATTT TAAAGACCTG
GACGAAAATG GGTTGCCCGA TGACGGGGAA TGGGATGCTG ATAGCGATGG ACAACCGGAT
AACTATTTTC TGGTTACCAA TGCCTTGACC CTTACAGACC AATTGTCCGA AGCTTTTAGC
GAAATTCTTG GGATGACGTC TTCGGCTGCC GCTATCGCAA CCAACTCTAC CCGGCTCGAT
ACCGATACCC TTATCTACCA GGCGCGGTTT GAGAGCGGTG ATTGGTTCGG ACAGTTGCTG
GCTTATCCAG TGAACGAAGA TGGCTCCGTC GGTTTGCCTG TCTGGGATGC GGCAGAGTTG
TTGCCCTTGC CCATCAATAG GGATATTTAT ACTCTCAACC CTGATGTATC CGGAACTCCG
CAGGGCGTTC CTTTTACCTG GACGACAACG ACCGAATTGC ATACAACTCA GCAAGCCCTG
CTGAATCAAA ACGGTTCGGG CGCAGTGGAT GGCTTGGGGA AAGAACGATT GAATTATTTG
CGCGGAGACC AGTCTGAAGA GCAAAAATAC GGTGGTCCTT TCAGGAATCG TGATAGTGTA
TTGGGGGATA TCGTTAATTC GGATCCGTGG TTTGTCGGTA CGCAAAATTA TGGTTACGGC
GATCTTCCGG ATCTGGAAGG GTCAACCTAT CTTAGCTACC GGGAATCGGC CGTTTACCAA
AACCGCCCCA AAATGTTGTA TGTGGGTGCT AACGACGGTA TGTTACACGC TTTTGATGCC
GGAAACGGGG AAGAGAAGTT TGCCTATGTT CCTCTCGGTG TCTTTCCAAA TCTGAGCGCC
CTTACCGATC CGACTTACGA ACACCAAATG TATGTCGACG GCTCCCCCCG GGCGACCGAT
GCCTATATCG ATATTTCCGG TGATAGTATT CCAGAATGGA GAACCGTTCT CGTCGGCACG
TTGGGTGCGG GTGGTAAGTC GGTTTTCGCT CTCGATGTTA CCGAACCGGA CAGCTTTACC
GAAGATAACA TCCTGTGGGA ATACGCCGAT ACGGATCTAG GCTATACTAT CGGCCAGGCC
TATATCGTCC GCATGGCCAA CGGTAGATGG GCTGCCGTGT TCGGTAATGG CTACAACAGT
ACTAACTATA CAGCTGCCCT TTATATCGTC GATCTGGAGA CGGGAGCTTT GATCAAAAAG
ATCGATACAG GCACCGGGAG TTCGGCTCAA CCGAATGGTT TAGCGACCCC AGCGCCTGTT
GATTATGACG GGGACCGTAT CGTTGATGCC ATATATGCCG GCGACCTGCA TGGCAATATG
TGGAAATTTG ATGTCAGTGC AACCAATATC AATAGTTGGG TGATTGCTCT AAAAAAGGGC
AGTACTTATA TGCCTTTATT TACAGCCAAG GGACCCTCGG GGGAAATTCA GCCGATTACC
AGTCGGCCCA ATGTAGGATA CGGTCCGAAT GGAAATAGTG TCGAGGTCAT GGTCTATTTT
GGTACCGGGC AATATTTTGA AAAGTTTGAT AATGTGGTGG GGACAAATCC GCCGGTACAA
AGTTTTTACG GTATTCGAGA CAGCCGTGAT AACAACGCTC AGATCGCTGA AACTGATCGT
AGCGTTCTCG TGGAACAATC CATTCTTGTA GAGCTCAATG CCTTCGATTA CGATCTCCGG
GTTATTTCGG ACTACGATGT GGTCTACGGT TCCGATGTGA AAGGCTGGTA CATGGATATG
GTTTCCCCGA TAAACGGTGC GGAAGGCGAA AGGGTCGTCG ATTCGCCGTT GTTGATTGGC
GATCATCTGG TTTACACTTC GGTTGTACCG TCAGGAAATC CTTGCGAATT CGGCGGGACC
GGTTGGTTGT ATGAGGTAGA TCCCCTCACC GGAGGACGGG TTACCTACAG CGTTTTTGAT
CTCGATGGTG ATGATCTATT TGACGAAGGG GATTATGTTA CCGTGGAGAT CGATGGCAAA
GAAGTTAAAG TTCCGGTCAG CGGAAAACGT TCTCAAAGCG GCATCATTAC GACCCCCGGT
GTAATTTCTG CGGGAACGAA GGAATACAAA TTGTCGAGTA CCTCCTCCGG TACTATCGAA
ACGACAACGG AAAAACCCGG TGACGGTAGT TTCCTGGGAC GCTCATCCTG GCGACAGATA
CGATGA
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| Protein sequence | MTTSAVAGEV AQSPLFLTQE VPPLNLIVMG RDHKLYYEAY NDASDLNNDG KLDIRYDPAI
EYFGYFDSYK CYEYDGSASP ARFDPSSVSA DKTCSGSNEW SGDFLNYLTT ARIDALRKVL
YGGYRSVDTA TETVLERSHV PQDAHSWGKE YASVAVDGYD IQDYTPLALP DSGNRHLFGN
TTLRADDTIP RLRVLPNSSH RIWEWVSKEQ PVLDSSLESS GTSYTGYPAS HSAYEDLVNQ
FATASHLQGS QSVSLIDGSG NPFGSDDYYL TVFKGYLVVS TAGTYSFSVN GDDAVEVLVD
GTVVTGWYSG HGASSTVPPS GVGTISLGSG NHKVEFRHQE ASGSDSYELW WSGPDSGSSW
QIVPAASYSG LIQSVYDVST SNSVITDYAV RVEVCKSGML ESNCRQYTDA SSVDHYKPAG
LLQEYGEDDQ MLFGLLTGSY TKNTSGGVLR KKMGSFSDEV DAETGQFTSV NGIVKTIDKL
RTIGFSTGYT YNQNCGWITT RPINDGECRM WGNPIAEMMY EGVRYFSGKG SPTSAFDIAS
SGNDDATLGL PLASWDDPFA EGNNEYCAKP FQLIISDINP SYDTGQLPGS YFNSFSGDVS
DLDVDSLGQK IWGHEYGSDQ KIFIGQSGSV YDGAPTPKAA ESFGSVRGLA PEEPTKHGGY
YAGSISLFAN QNDISDAEEE QKMTTFAVAL ASPLPQIKIP VGDSTITLVP FAKSVGGYSI
NATQGSFQPT NSIVDFYVES LSSTSGKFRI NFEDVEQGAD HDMDAIVEYT YEVIDSDTVK
INVESTYAAG SIIQHMGYVI SGTTADGTYL EVRDVDTTEA SDPDYFLDTP PGGTIGVDWD
DDKPLPLTAS RSFKVSGNNS AFFLKNPLWY AAKYGNFKDL DENGLPDDGE WDADSDGQPD
NYFLVTNALT LTDQLSEAFS EILGMTSSAA AIATNSTRLD TDTLIYQARF ESGDWFGQLL
AYPVNEDGSV GLPVWDAAEL LPLPINRDIY TLNPDVSGTP QGVPFTWTTT TELHTTQQAL
LNQNGSGAVD GLGKERLNYL RGDQSEEQKY GGPFRNRDSV LGDIVNSDPW FVGTQNYGYG
DLPDLEGSTY LSYRESAVYQ NRPKMLYVGA NDGMLHAFDA GNGEEKFAYV PLGVFPNLSA
LTDPTYEHQM YVDGSPRATD AYIDISGDSI PEWRTVLVGT LGAGGKSVFA LDVTEPDSFT
EDNILWEYAD TDLGYTIGQA YIVRMANGRW AAVFGNGYNS TNYTAALYIV DLETGALIKK
IDTGTGSSAQ PNGLATPAPV DYDGDRIVDA IYAGDLHGNM WKFDVSATNI NSWVIALKKG
STYMPLFTAK GPSGEIQPIT SRPNVGYGPN GNSVEVMVYF GTGQYFEKFD NVVGTNPPVQ
SFYGIRDSRD NNAQIAETDR SVLVEQSILV ELNAFDYDLR VISDYDVVYG SDVKGWYMDM
VSPINGAEGE RVVDSPLLIG DHLVYTSVVP SGNPCEFGGT GWLYEVDPLT GGRVTYSVFD
LDGDDLFDEG DYVTVEIDGK EVKVPVSGKR SQSGIITTPG VISAGTKEYK LSSTSSGTIE
TTTEKPGDGS FLGRSSWRQI R
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