Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pcar_2147 |
Symbol | pilC |
ID | 3724839 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pelobacter carbinolicus DSM 2380 |
Kingdom | Bacteria |
Replicon accession | NC_007498 |
Strand | - |
Start bp | 2499367 |
End bp | 2500584 |
Gene Length | 1218 bp |
Protein Length | 405 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 637751748 |
Product | putative general protein secretion protein |
Protein accession | YP_357556 |
Protein GI | 77919741 |
COG category | [N] Cell motility [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG1459] Type II secretory pathway, component PulF |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 73 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGGCCAAGT TTGCGTGGGA AGGCAAGACT CGCGGCGGAG ATGTCCAAAA AGGTGAGATG GATGCACCCA ATGAGGCAGC TGTCGGCGCA CAGCTACGTC GTCAGGGCAT CATGCCCTCC AAAATAAAAG AGCGCGGTAA GGGCCTCGAT GTCGAGATAA AAATTCCGGG TATGGGGGGG AAGGTAACCA CCAAGGACCT GGTTGTTTTT ACACGGCAGT TCGCCACCAT GATCGATGCA GGCCTGGCAT TGGTTCAGTG TCTTGATATT CTGGGTCGGC AGCAAGAAAA TCAAGTGTTA AAAAAGGTAT TGGTAGAAGT TAAAGAGGGG GTAGAGTCCG GCTCCACTTT TGCCGATGCT TTAAGCAAAC ATCCCAAGAT CTTTGACGAG CTGTTTGTTA ACCTGGTGGC CGCCGGTGAA GTTGGCGGTA TTTTGGATAC CATCCTCAAC CGATTGGCTG CTTATCTCGA AAAAGCCCAT AAGCTTAAGA AAAAAGTTAA GGGCGCTATG ACCTATCCTG CTACGGTTGT TGGTATTGCC GTCATTGTTA TTGGGGTTAT TCTTGTTTTC GTTATTCCTG CCTTTGAAAA AATGTTTGCC GATTTCGGTG GCGTGTTGCC ATTGCCGACC CGTATCGTTA TTGCCATAAG TAATTTTATT CAAAGTTGGA TTTTTGCCAT TATAGGCGGA GTGCTATTGA CTAGCTTCCT TTTTAAACGC TTTTATGCGA CCCCCAAGGG CCGAACCCTT GTCGATGCTT ATGCGCTGAA ATTGCCTGTG TTTGGCGTTT TGATCCGTAA AGTGGCCGTG GCCAAATTCT CTCGTACTTT GGGGACCATG ATTTCCAGCG GTGTGCCGAT TCTCGATGGA CTTGATATTG TGGCTAAAAC TGCTGGCAAC AAAACGGTGG AAAATGCTGT GTATAAAGTC AGACAAAGTA TAAGCGAGGG TAAAACAATC GCTGAACCAT TAGAAAAAAC AGGGGTTTTT CCTCCTATGG TATGCCAAAT GATAGGGGTT GGTGAACAGT CTGGCTCTAT CGATGGCATG TTGAATAAAA TTGCTGATTT TTATGATGAC GAGGTTGATG AAGCGGTTGG AAATCTTACT GCCATGATGG AGCCGATGCT CATGTTGTTT CTCGGTACGA CAGTCGGTGG TCTGGTTATC GCCATGTATC TGCCGATCTT CAAGATTGCC GGAACCGTTG GTGGTTGA
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Protein sequence | MAKFAWEGKT RGGDVQKGEM DAPNEAAVGA QLRRQGIMPS KIKERGKGLD VEIKIPGMGG KVTTKDLVVF TRQFATMIDA GLALVQCLDI LGRQQENQVL KKVLVEVKEG VESGSTFADA LSKHPKIFDE LFVNLVAAGE VGGILDTILN RLAAYLEKAH KLKKKVKGAM TYPATVVGIA VIVIGVILVF VIPAFEKMFA DFGGVLPLPT RIVIAISNFI QSWIFAIIGG VLLTSFLFKR FYATPKGRTL VDAYALKLPV FGVLIRKVAV AKFSRTLGTM ISSGVPILDG LDIVAKTAGN KTVENAVYKV RQSISEGKTI AEPLEKTGVF PPMVCQMIGV GEQSGSIDGM LNKIADFYDD EVDEAVGNLT AMMEPMLMLF LGTTVGGLVI AMYLPIFKIA GTVGG
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