Gene Pcar_2138 details

Gene Information

• Locus tag: Pcar_2138
• Symbol: pilM
• ID: 3724830
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pelobacter carbinolicus DSM 2380
• Kingdom: Bacteria
• Replicon accession: NC_007498
• Strand: -
• Start bp: 2489552
• End bp: 2490616
• Gene Length: 1065 bp
• Protein Length: 354 aa
• Translation table: 11
• GC content: 44%
• IMG OID: 637751739
• Product: Tfp pilus assembly protein, ATPase PilM
• Protein accession: YP_357547
• Protein GI: 116878577
• COG category: [N] Cell motility; [U] Intracellular trafficking, secretion, and vesicular transport
• COG ID: [COG4972] Tfp pilus assembly protein, ATPase PilM
• TIGRFAM ID: [TIGR01174] cell division protein FtsA; [TIGR01175] type IV pilus assembly protein PilM

Plasmid Coverage information

• Num covering plasmid clones: 9
• Plasmid unclonability p-value: 0.0000000000719379
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTTTTTCG GACTGTTTGG AGCGAGCGAG GATGTCGTCG GTATCGATAT CGGTACCAGG 
TCTATCAAGC TGGTTCAATT GAAGCAGGTG AAGGGTAAAT ATCAGTTGGT AAATTTGGGG 
ATTGCCCAAT TGCCAACCAG TGCCATAGTT GACCATGCAA TCATGGATTT GGCAGCCGTG 
GCTGAATGTG TTCGGAGCCT GGTGGAAAGC CAATCGGTCC AGACAAAAAA TGTCGCAACT 
TCCGTTTCCG GACATTCTGT TATTATCCGA AATATTTTTT TGCCGACGAT GAGCGATGAT 
GAGGTTGAAG TCTCCATTGA ATGGGAAGCG GAACAGTATA TACCTTTTGA GCTTTCTGAT 
GTTAATCTCG ATTTTCAAAT TCTCGGGCCT GATCCAAAAG ATCCATCTCA GATAAAAGTA 
CTGCTTGTTG CAGCCAAAAA AGATTTTATA GATGAATTTC TTTCCGTGTT TAACGAATGT 
GGATTGAATC CGGTCGTTAT GGATATTGAT TGTTTCGCCC TCGAGAACGT CTTTCAGGCA 
AACTATGAGC AGGAGGAGGC TGTTGTCGGA CTGATAGATG TTGGATCCAG TTCGATGAAT 
ATAAATGTTT TGCACGAAGG TCTTTCCGTT TTTACTCGTG ATATACAAGT AGGCGGAAAT 
ATGTTCAATG ATGAAATCCA AAAAAGACTG GGCCTCAATA GTGAAGAAGC CGAGTTGGTT 
AAACTCGGTG GAACCATAGA GGAGGTTCAA CCCGATGTGG TTGCCGAAAT TGTATCCGAT 
TCCATGGAGC AACTAGTGCA AGAGATTCAA CGTTCCATTG ACTTTTTCGC GGCAACTTCT 
TCCGATAAGC AGGTTGAAAA GGTCTATCTT TCTGGCGGGG TTGTGAAGAC CTCCGGATTG 
GTCGATGCAT TGCAGAAACA GCTGGGGATT CCCGTTGAAA TTATGAATCC TTTGCGGAAT 
GTGTCCATAG ATGGTGATAA GTTTGATATG GAGTATGTAG AGTCGGTGTT GCCTTTCCTG 
GCTATCGGTA CCGGACTTGC GATGAGGAGG CTTGGCGATA AATGA 

 

Protein sequence

MFFGLFGASE DVVGIDIGTR SIKLVQLKQV KGKYQLVNLG IAQLPTSAIV DHAIMDLAAV 
AECVRSLVES QSVQTKNVAT SVSGHSVIIR NIFLPTMSDD EVEVSIEWEA EQYIPFELSD 
VNLDFQILGP DPKDPSQIKV LLVAAKKDFI DEFLSVFNEC GLNPVVMDID CFALENVFQA 
NYEQEEAVVG LIDVGSSSMN INVLHEGLSV FTRDIQVGGN MFNDEIQKRL GLNSEEAELV 
KLGGTIEEVQ PDVVAEIVSD SMEQLVQEIQ RSIDFFAATS SDKQVEKVYL SGGVVKTSGL 
VDALQKQLGI PVEIMNPLRN VSIDGDKFDM EYVESVLPFL AIGTGLAMRR LGDK