| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcar_2134 |
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| Symbol | pilQ |
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| ID | 3724826 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pelobacter carbinolicus DSM 2380 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007498 |
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| Strand | - |
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| Start bp | 2485210 |
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| End bp | 2487834 |
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| Gene Length | 2625 bp |
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| Protein Length | 874 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 637751735 |
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| Product | type IV pilus biogenesis protein PilQ |
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| Protein accession | YP_357543 |
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| Protein GI | 77919728 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4796] Type II secretory pathway, component HofQ |
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| TIGRFAM ID | [TIGR02515] type IV pilus secretin (or competence protein) PilQ |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.00000140204 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGATGTG TGCCGTTTTT AAATGAAGGA AGACGCGTGT TTACCGGTTT GCTTTTGGTT
GTCTGGGCGG TTTTTCTGCC GGCATTTGTA TTTGCAGAAC CGGGCGGAAT CGATTCAAAC
AGGATCGTTT CGGTGGTTCA TGACCAAGGT GGGGTGTTGA TTTCTACCTC CGGGGCCGTT
GGTGATGCTT ATTCTGTGTA TGATGCATTG GATCCTCTGC GTATTGTCGT AGATATATCC
GGTGTGGGGG TCGATGGTCT TGATCCTGAA ATTCAGGTTT TCGATGGTGT CGTTGAACAA
ATCAAGCTTT CTGAGTTTCA GTTGTCTTCC GGTCAGTTGG GGCGGGTGGA AATTTTTTTA
ACAAAGCCCA TGACGTCTGA AGTTGTTTCG ACCGAAAATG GAATCAGAGT CGGTTTGAAA
GCGAATGCCT CTGGACTTGC CGGGACCAGT GAGGCTGATG TTGCTGTAAC GACTCGGTCT
TATGAGGAAT CGATTCAACA GTCTTCTGTC TCTATGGACG ATGCCAAGAT TATCGGTAGC
GTTCAGGTTG AAACCGGGAA AACAACCGTG ATTGCCGATG GTCTTATCGG GAAGGTGAAA
CATTTTGCCC TTGTCGATCC TGCAAGGCTC GTTGTTGATG TTTATGGTGT AAAAGCCGGT
TTTGATGACA AAAGTTTCGG GTTGAATTCG GGCCTTAAAA AAATGAGGGT TGGTGCTTAT
CCGGATAAAT TACGGTTTGT TTATGATGCC GCGGATTCAG GTTTGCCTGC CTATTCCGTT
GATAAAGCCG GCAATACTAT GACCGTAGCA TGGGGAGGCG TTGCCGTTTC AGGAAAACCT
GTTCCTGATG CGGTGGCTGC ACCTGCTCCG CTGATGGCGA CATCCGCGAA AAAGTCCATG
TCTGATAAGG TCAGTGTAAC TTCCGTCGAT TTTCGCGTTG AGGGTCATAA ATCTATACTT
TCAATAGGCC TTTCCTCTCC TGGAGATATT GTACAGCCGC TCAGCACAGG TAATATCATC
CAGTTTGGTA TTAAAAGAGC TTCTATCGGT CAGCAGCATC GCCGTACGAT TGATCCGTCG
GTTTTTCCGA CCTCTGTGCG GCTTATAACC CCTTACACTA TCAGGAAAAA CGGGGGTGAT
GAAGTACGCT TTGCGGTCGA AATGAAGGAG ATGCAGACTT ATGAATTGCG TCAGGAAAAA
GATGCCCTGC TTTTTATTGT AGATAACGGA CATTTTGTCG AGGGGCTGCC TTCAGGGATT
CAGCATGAGG TGGTTCCCGT AAATGTGCCT GCCGTATCCG GACAGGGGCT TTTCCCCGGA
AATGATATGC CGGAAAATGG AAAGGATGGT ATAAAGCCGG ATGGTAACGT GCCCCTGCAA
ATGGATGCTG ATACGATTAC AATTCAACGT AAAAAAGAAT ATGTTGGCCA AAAAATATCC
CTGGTTTTTG ATGATGCTGA TATTCGGAAT ATTCTCCAAC TTATCGGTGA AGTCAGTGAT
TTAAATATTA TCGTTGGAGA CGATGTTAAG GGAAATATGA CGTTGCGTCT CATCGATGTT
CCGTGGGACC AGGCCTTGGA CCTCGTGCTT GAAATTCGGG AACTCGGCAA GTTACAGGAA
GGGAATGTGC TGAGGATTCT TCCTCTCGCT AAAATCAGGC AGATGCAGCA GGAACAGTTT
GCTGCTGCCC GCGCCAAGGA GAAACTTGAA GATCTCGTTA CCGATTTGAT TCCGGTGAGT
TACACTGATG TTGAGGGGCT TGTTGAAGCC TGTAAAAAGC GCTTGTCGGA TCGGGGCAAA
GTTATTGGTG ATGTTCGGGA TAAAAAGCTG ATTGTTACTG ATATCCCTTC CGTTGTTGCC
GATATTAAGC AATTGGTTCG GCTTTTGGAT ACACCGGTGC GTCAGGTTTT GATTGAAGCA
CGTATCGTTG AGGCGAGTGC AACGTTTTCG CGTGACCTCG GGGTTAATTG GGGTATTAGT
TATCAACATA ATCCTGGCAG CGATGTCGAA GGCAATGACG CAAGTATCGG TATGGGGGGG
ACCTTGGTAG GTATTCCCGT TTCACCGGGC GAAGTTTCCT CTGGTATCGT CAGTGGATTG
ACATTTGGAC AGGTTGGAGT GGACAAAACA GTTCTTGACT TAAGGCTCGC CGCATTAGAA
CAGTCTGGAC ACGGTCGGAT TGTTTCAACT CCAAGAGTGT CTACGCTCAA TGGTGAAGAG
GCTGAGGTTG CTCAGGGTAC TGAGATCCCT TATTTGTCTG TTAGCGACGA CGGAACCAAA
ACAGAATTCA AGAAAGCGGA GTTGAGTCTT AAGGTTACGC CTGAAATAAA TCCGGATGGT
AGTGTCATAC TTGAAATTGA GGCTAAAAAT GACTCTAGGG GGGCTAATAC AGGATTGTCT
GAAGCACCCG CTATAGATAC CAAACGTGCA ACAACAAAGG TTTTGGTTAA AGATGGCGAA
ACGACCGTCA TCGGTGGTAT TTTTATCCAG GATAAATCTG AAAGTGACTC CGGCGTTCCT
TGGTTGATGA ATGTCCCCAT TTTGGGCCAC TTGTTTAAAT CCAAGTCGGT CAGCGAAGAG
CGGCGTGAGT TGCTGGTGTT CATCACCCCG CGCATTTTGG ACTAG
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| Protein sequence | MRCVPFLNEG RRVFTGLLLV VWAVFLPAFV FAEPGGIDSN RIVSVVHDQG GVLISTSGAV
GDAYSVYDAL DPLRIVVDIS GVGVDGLDPE IQVFDGVVEQ IKLSEFQLSS GQLGRVEIFL
TKPMTSEVVS TENGIRVGLK ANASGLAGTS EADVAVTTRS YEESIQQSSV SMDDAKIIGS
VQVETGKTTV IADGLIGKVK HFALVDPARL VVDVYGVKAG FDDKSFGLNS GLKKMRVGAY
PDKLRFVYDA ADSGLPAYSV DKAGNTMTVA WGGVAVSGKP VPDAVAAPAP LMATSAKKSM
SDKVSVTSVD FRVEGHKSIL SIGLSSPGDI VQPLSTGNII QFGIKRASIG QQHRRTIDPS
VFPTSVRLIT PYTIRKNGGD EVRFAVEMKE MQTYELRQEK DALLFIVDNG HFVEGLPSGI
QHEVVPVNVP AVSGQGLFPG NDMPENGKDG IKPDGNVPLQ MDADTITIQR KKEYVGQKIS
LVFDDADIRN ILQLIGEVSD LNIIVGDDVK GNMTLRLIDV PWDQALDLVL EIRELGKLQE
GNVLRILPLA KIRQMQQEQF AAARAKEKLE DLVTDLIPVS YTDVEGLVEA CKKRLSDRGK
VIGDVRDKKL IVTDIPSVVA DIKQLVRLLD TPVRQVLIEA RIVEASATFS RDLGVNWGIS
YQHNPGSDVE GNDASIGMGG TLVGIPVSPG EVSSGIVSGL TFGQVGVDKT VLDLRLAALE
QSGHGRIVST PRVSTLNGEE AEVAQGTEIP YLSVSDDGTK TEFKKAELSL KVTPEINPDG
SVILEIEAKN DSRGANTGLS EAPAIDTKRA TTKVLVKDGE TTVIGGIFIQ DKSESDSGVP
WLMNVPILGH LFKSKSVSEE RRELLVFITP RILD
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