Gene Pcar_2126 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPcar_2126 
Symbol 
ID3724818 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePelobacter carbinolicus DSM 2380 
KingdomBacteria 
Replicon accessionNC_007498 
Strand
Start bp2476605 
End bp2478131 
Gene Length1527 bp 
Protein Length508 aa 
Translation table11 
GC content56% 
IMG OID637751727 
Producthypothetical protein 
Protein accessionYP_357535 
Protein GI77919720 
COG category[M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG1538] Outer membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones73 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGGTGTA TTTACATGGC CTTTGTTCTT GTGTTGCTGG CGGGGTTTCC GGTAGCGGCG 
CAGCCCCCTG CCGATACCTT CTCGCCATCA GGAGCGTCGG TGCCGACACT GACCTTGAAC
GATGTCTTGC GGATGGCCCT GGAACGCAAC CTCGATTTGC AGGCTCAGCA GTACGATACC
CGTGCCGGTG ACGCCGAAGT CAGCAAAGCC TACGGTCTCT ACGATCCCGT TCTCGATCTT
GCCTACGCTG AAGGGGAGAG CCGCCAGCGA CTTAACCTGC AATTTTACAG CGCTCAGTCC
AGGGAACGTT ACCGGCAATT CGATCTTGGA CTTACTCAGA AAATTCCCAC CGGTGCTGAT
CTGAGTCTCG AATTTACCAA TTTACGCTCC GATCAGGATC CTGCTCCGGG CATGAATCCT
TCCTACGAAG GGGAACTTAC CTTCAGTTTG GTACAGCCCC TGTTGAGGGG TTTTGGTAGT
ACCGTCACCG AACAGGATAT TCTGTTCGCC GTCAAAGACC GGGATATTTC CATAGAAGAT
CTGCGCGAAA GCGCCTTTCT GGTGCTGGCC GATTCCCGGG ATACTTTTTT CGAGGTGTTA
CGGTTGCGTG ATAACGTACG TTATCGTGAG GCATCCGTGG CCCTGGCCGC CAGTCTGCTC
AAGGAAAACC GGGCCAGGGT CAAGGCCGGG GTTTTGCCCC GAGTCGATGA GCTGGAGGCC
GAATTCGGCC TTAAACAACG GGAACGGGAT TTACTGGATG CGCAGCGCGA ATACCGGGAT
GGGCTCGATG GCCTGGCATT GCTGCTCGAT CTGAAAGCCC CTATTGCTTT AGTCGATGGG
CAGCCCGGGA TTCCAGAAAT CCACCCTGAC CTGTCCGAAG GCTACGCCGA AGCCCTTGCC
AAACGCCCCG ATGTGCAACG CCGATTGCGC ACCATCGAAC GTCTGGAACT GCAAAGTCGC
ATCGCACGCA ATGAGCTTCT ACCGGCCCTG GATCTGGCCG CCAGCTACGG TCACAAAGGA
CTCGGGCGGG ATTATAGCGA TAATCTTCGC GACCTCGGTT CCAATGATTT TCGCAATTGG
GAGGTCGGGT TGACCCTTTC CTATCCGCTG GGCAACCGCG AAGCCCGCCA CGAATATCGG
CGCAGCGAAT TCGAACGCAA GGGCCGGGAG GCCCAGCTGG GCCAGTTGAA GAATCAGGTG
CATACCGAAG TGCAGGCCGC TATCCGGTTG CTTGGTGTGA GCCGCAAAAA GATCGACGTT
TCCGCCAGTC AATTGGCCTT TGCCGAGGAA AAACTACGTA CCTTGCTCAA ACGCAAGGAG
GTCGGGCTGG CCACCACCCG GCAGGTGCTG GAAGGCGAGG AGGATTATGC CTTGGCGCAG
ACCGATCAGG CGGCTGCCTT ATCCGATTAC AATAAGGCCG TGACCGAATA TTATAAAGTG
ACCGGACAAC TGCTGGACCA GGAACATGTG CGGTTTGTCG ATGAATTCAA GAACGAATCA
CAGCCCCTGC TCCAATACAA GCCATGA
 
Protein sequence
MRCIYMAFVL VLLAGFPVAA QPPADTFSPS GASVPTLTLN DVLRMALERN LDLQAQQYDT 
RAGDAEVSKA YGLYDPVLDL AYAEGESRQR LNLQFYSAQS RERYRQFDLG LTQKIPTGAD
LSLEFTNLRS DQDPAPGMNP SYEGELTFSL VQPLLRGFGS TVTEQDILFA VKDRDISIED
LRESAFLVLA DSRDTFFEVL RLRDNVRYRE ASVALAASLL KENRARVKAG VLPRVDELEA
EFGLKQRERD LLDAQREYRD GLDGLALLLD LKAPIALVDG QPGIPEIHPD LSEGYAEALA
KRPDVQRRLR TIERLELQSR IARNELLPAL DLAASYGHKG LGRDYSDNLR DLGSNDFRNW
EVGLTLSYPL GNREARHEYR RSEFERKGRE AQLGQLKNQV HTEVQAAIRL LGVSRKKIDV
SASQLAFAEE KLRTLLKRKE VGLATTRQVL EGEEDYALAQ TDQAAALSDY NKAVTEYYKV
TGQLLDQEHV RFVDEFKNES QPLLQYKP