| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcar_2110 |
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| Symbol | aksA |
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| ID | 3724801 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pelobacter carbinolicus DSM 2380 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007498 |
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| Strand | + |
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| Start bp | 2459719 |
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| End bp | 2460921 |
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| Gene Length | 1203 bp |
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| Protein Length | 400 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 637751711 |
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| Product | trans-homoaconitate synthase |
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| Protein accession | YP_357520 |
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| Protein GI | 77919705 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0119] Isopropylmalate/homocitrate/citramalate synthases |
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| TIGRFAM ID | [TIGR02660] homocitrate synthase NifV |
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Plasmid Coverage information |
| Num covering plasmid clones | 80 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCATACCG ATAAGCTGCC CGACATTATT ATTGACGACA CCACTCTGCG GGACGGCGAA
CAGACAGCCG GCGTGGTCTT TTCCCTGGAA GAAAAAAAGA CCATCGCACG CATGCTGGAC
GACATCGGCG TACAGGAACT CGAATGTGGC ATCCCGGCCA TGGGGCGTGA AGAGCAACGC
AGCGTCAAAG CTCTGGTCGA CCTGGGGCTG CATGCCAGAT TAATCACCTG GAACCGCGCC
CTGGTGGACG ACATCCGAGC TTCTTTGCAG TGCGGCGTCA ATGCCGTCGA TATATCCCTG
TCGGTTTCCG ATCTCCATAT CCGCCACAAA CTGCGTAAAG ACCGTCATTG GGTACGTGAG
CAGCTCAAAC GGGCCCTCGG TTTTGCCAAG CAACATGATC TGTACGTTTC CATCGGCGGC
GAAGACGCCA GTCGTGCCGA TCTCGACTTT TTGGTTGAGT TGATGGAACT GGCACGCAGC
ATGGGAGCCG ACCGGTTTCG TTTCTGCGAC ACCCTCGGGC TGCTCGATCC CTTCGTTACC
TTCGAAAAAA TACGCTACCT GACTCAACGC GTTGACCTGG ATATCGAGGT GCATACGCAT
AACGACCTCG GTATGGCCAC CGCCAATGCC ATAGCCGGGG TTCGCGCCGG TGCCCGTTTT
ATCAACACCA CGGTCAACGG ACTCGGCGAA CGGGCCGGCA ATGCCGCTCT TGAAGAAGTG
GTCATGGGGC TCAAACATGC CTGCGGCGTA AAATGTCCCA TCGACACCAG TCGTTTTGTG
GAAATTTCGC GTTATGTCGG TGCGGCCAGT AACCGACCGG TACCCGCCTG GAAACCAGTG
GTCGGAGAAC GCGTTTTTGC CCATGAATCG GGATTGCATG TGGATGGAGT CCTGAAAGAT
CCCCGTAACT ATGAACCGTT CGAACCCCAC GAGGTGGGAT CGAGTCGCTT GCTGGTACTG
GGTAAGCATA CGGGCAGACA CGGTCTTGCA GCTCGCGTGA AAGGCCTTGG CCTCGACCCC
GGCGACATCT GTCTGTCCAC TCTATTGCGG CGTATCCGGG CCATCTCGCA GCGACGAAAA
CGCCCCGTTG AGGATGCCGA ACTGGAGGGG TTGTATCGAT CACTGGCGCA AGCTTCTCAG
CCAACCGGTG AAGCGATACC CGAACAATCT GCTCCTGTTT TGAAAAAAGC AGCCGAGGCC
TGA
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| Protein sequence | MHTDKLPDII IDDTTLRDGE QTAGVVFSLE EKKTIARMLD DIGVQELECG IPAMGREEQR
SVKALVDLGL HARLITWNRA LVDDIRASLQ CGVNAVDISL SVSDLHIRHK LRKDRHWVRE
QLKRALGFAK QHDLYVSIGG EDASRADLDF LVELMELARS MGADRFRFCD TLGLLDPFVT
FEKIRYLTQR VDLDIEVHTH NDLGMATANA IAGVRAGARF INTTVNGLGE RAGNAALEEV
VMGLKHACGV KCPIDTSRFV EISRYVGAAS NRPVPAWKPV VGERVFAHES GLHVDGVLKD
PRNYEPFEPH EVGSSRLLVL GKHTGRHGLA ARVKGLGLDP GDICLSTLLR RIRAISQRRK
RPVEDAELEG LYRSLAQASQ PTGEAIPEQS APVLKKAAEA
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