Gene Pcar_2107 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPcar_2107 
Symbol 
ID3724798 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePelobacter carbinolicus DSM 2380 
KingdomBacteria 
Replicon accessionNC_007498 
Strand
Start bp2456671 
End bp2457564 
Gene Length894 bp 
Protein Length297 aa 
Translation table11 
GC content58% 
IMG OID637751708 
ProductMoaA/NifB/PqqE family nitrogen fixation protein 
Protein accessionYP_357517 
Protein GI77919702 
COG category[R] General function prediction only 
COG ID[COG0535] Predicted Fe-S oxidoreductases 
TIGRFAM ID[TIGR01290] nitrogenase cofactor biosynthesis protein NifB 


Plasmid Coverage information

Num covering plasmid clones79 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCTGCCA AACCTTGCTC CGGAAACAAT CGCCCTGCTG CCGGCCACCC ATGCTTCGGT 
GCCGGGCATC AAAATAATGC CCGCATTCAC CTGCCTGTGG CACCGGGGTG CAATATCAGC
TGCGGGTTCT GCGAACGCCG CTTCGATTGC GCCAACGAAA ACCGTCCCGG CGTTACCAGC
CGGGTGCTCT CCCCGAGTCA GGCGCTGCAT CGGGTCAAGG CTCTGCTGGC ACACCCGGAC
GTCGGTTCCA AATTAAAGGT TGTCGGCATC GCCGGTCCCG GCGACCCGCT TGCCAATGAA
AAAACCTTCG AAACCCTTAG ATTGGTTAAG GAAGCGTATC CCGACCTGCA ACTGTGCCTC
TCCACCAACG GTCTGGTGCT GCCCCAGCGT TTGGAGACTT TGCTCGAAAT CGGCGTTGGC
AGTATCACCG TAACCATGAA TGCCATCACT CCGGAAACCG GTGCCAAGGT TTACCAGTGG
GTCAACGTCA ACGGCACGGT AATGCGTGGG CAAAAGGGAG CATCCGCCCT GATCGATGCC
CAGATGGCCG GTATCCAGGC TGCGGCCCGT GCCGGCATGC TGGTTAAGGT CAATAACGTC
TACATCCCGG GCGTGAATGA TCATGAAACC CTGCCTCTGG CCAAGATCGC CAAAAAACTC
GGTGCCAGCA TCATGAATAT TCTGCCGCTT ATCGCCCAGG GCGCTTTCCG CGACAATCCG
GTACCGAGCG ATGCACAGAT GGCCGTGGTG CGAGACCTCG CCGAGAAAAT TCTGCCGCAG
TCCCGCCACT GCAAACAGTG CCGTGCCGAT GCTGCCGGTG TTCTCGGGCA GGACATCGAT
GTGTCGATCC TGGACGCAGC CCCTGAATCT GTTACATCAA GCTTTTTCAA CTAA
 
Protein sequence
MSAKPCSGNN RPAAGHPCFG AGHQNNARIH LPVAPGCNIS CGFCERRFDC ANENRPGVTS 
RVLSPSQALH RVKALLAHPD VGSKLKVVGI AGPGDPLANE KTFETLRLVK EAYPDLQLCL
STNGLVLPQR LETLLEIGVG SITVTMNAIT PETGAKVYQW VNVNGTVMRG QKGASALIDA
QMAGIQAAAR AGMLVKVNNV YIPGVNDHET LPLAKIAKKL GASIMNILPL IAQGAFRDNP
VPSDAQMAVV RDLAEKILPQ SRHCKQCRAD AAGVLGQDID VSILDAAPES VTSSFFN