| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcar_2099 |
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| Symbol | nifD |
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| ID | 3724790 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pelobacter carbinolicus DSM 2380 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007498 |
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| Strand | + |
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| Start bp | 2448623 |
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| End bp | 2450083 |
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| Gene Length | 1461 bp |
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| Protein Length | 486 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 637751700 |
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| Product | nitrogenase molybdenum-iron protein alpha chain |
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| Protein accession | YP_357509 |
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| Protein GI | 77919694 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG2710] Nitrogenase molybdenum-iron protein, alpha and beta chains |
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| TIGRFAM ID | [TIGR01282] nitrogenase molybdenum-iron protein alpha chain
[TIGR01862] nitrogenase component I, alpha chain |
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Plasmid Coverage information |
| Num covering plasmid clones | 75 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAAAACG AAAATTCAGC CGTCAAGGCT CCCATTGAGG GCATCGAAAA AAAGGCGACG
GAAGAGCTGA TTGAGAAGAC GCTTGAGCTC TACCCGGAAA AAGCCCGTAA AAAACGCGAA
CCCCACATGT CCGCCAACGA CCCCGGCGTC GAAGGCTGTA CCGTCAAGTC CAACCGCAAG
ACCGTTCCCG GCGTCATGAG TGCCCGCGGT TGCGCCTATG CCGGCGCCAA AGGTGTTGTT
TGGGGTCCGA TTCGCGACAT GGCCCACATC TCTCACGGTC CGGTAGGTTG CGGTTACTAC
AGCTGGGGTA CCCGTCGTAA CCTGGTAGAC GGTCACCAGG GCGTCGATGT TTTCAGCGCC
ATGCAGTTCA CCTCGGACTT CCAGGAAAAA GACGTCGTCT ACGGCGGCGA TAAAAAGCTC
GCCAAGATCT GTGAAGAGGT TAAAGAGCTT TTCCCCTTGG CCAAAGGCAT CTCCGTACTG
TCCGAATGCC CGGTCGGCCT GATCGGCGAC GACATCAACG CCGTTGCCAA AAAATCCTCA
AAGGATCTGG ACCTGCCGGT TATCCCCTGT AACTGCGAGG GTTTCCGTGG CGTCAGCCAG
TCTTTGGGTC ATCACATCTC CAACGACAGT ATCCGCGACT ACGTTATCGG TACCCGTGAA
TTCGCCGACG AGCCGACCGA TTACGATATC GCCCTGATCG GTGACTACAA CATCGGCGGC
GACGCCTGGG CCTCCAAAAA GATCCTGGAT GAACTGGGCC TCAATGTCAA AGCCATCTGG
ACCGGCGACG GCCAGATCGA GCATATCGCG GCTACCCACC AGGTAAAATT GAACCTCATC
CACTGCTACC GTTCCATGAA CTACATGGCC AAGGTCATGG AAGAGAAATG GGGTATCCCC
TGGATGGAAT TCAACTTCTT CGGCCCCACC AAGATCGCTG CCAGCCTGCG CGCCATTGCC
GCTCGCTTTG ACCAGAAGAT CCAGGACAAC GCCGAGAAGA TCATCGCCAA GTACACCCCG
AAGATGCAAG CGATTGTCGA CGAATACCGT CCTCGCCTCG AAGGTAAGCG CGCCATGCTG
TTCGTCGGCG GCCTGCGCCC CCGTCACACC ATCGGCGCCT ACGAAGATCT CGGTCTGGAA
ATCGTCGGCA CCGGCTACGA ATTCGCCCAC AACGATGACT ACGATCGTAC CTACGAGGAA
ATGGCCAAAG GCACCCTGAT TTTTGATGAC GCTTCCGAAA TCGAGTTGGA AACCTGGGCC
AAGGAAATGA AGGTCGATCT GGTGGGCAGC GGTGTTAAGG AAAAATATGT TTTCCAGAAA
GCCGGCATCC CCTTCCGCCA GATGCACAGC TGGGATTATT CCGGTCCTTA CCATGGTTAT
GAAGGTTTCC CGATCTTCGC CCGGGACATC GATATGGCCA TCAACAGCCC GACTTGGGGC
CTGGTAAAGG CACCGTTTTA A
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| Protein sequence | MENENSAVKA PIEGIEKKAT EELIEKTLEL YPEKARKKRE PHMSANDPGV EGCTVKSNRK
TVPGVMSARG CAYAGAKGVV WGPIRDMAHI SHGPVGCGYY SWGTRRNLVD GHQGVDVFSA
MQFTSDFQEK DVVYGGDKKL AKICEEVKEL FPLAKGISVL SECPVGLIGD DINAVAKKSS
KDLDLPVIPC NCEGFRGVSQ SLGHHISNDS IRDYVIGTRE FADEPTDYDI ALIGDYNIGG
DAWASKKILD ELGLNVKAIW TGDGQIEHIA ATHQVKLNLI HCYRSMNYMA KVMEEKWGIP
WMEFNFFGPT KIAASLRAIA ARFDQKIQDN AEKIIAKYTP KMQAIVDEYR PRLEGKRAML
FVGGLRPRHT IGAYEDLGLE IVGTGYEFAH NDDYDRTYEE MAKGTLIFDD ASEIELETWA
KEMKVDLVGS GVKEKYVFQK AGIPFRQMHS WDYSGPYHGY EGFPIFARDI DMAINSPTWG
LVKAPF
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