| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcar_2098 |
|---|
| Symbol | nifH |
|---|
| ID | 3724789 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pelobacter carbinolicus DSM 2380 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007498 |
|---|
| Strand | + |
|---|
| Start bp | 2447668 |
|---|
| End bp | 2448546 |
|---|
| Gene Length | 879 bp |
|---|
| Protein Length | 292 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 637751699 |
|---|
| Product | nitrogenase iron protein |
|---|
| Protein accession | YP_357508 |
|---|
| Protein GI | 77919693 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG1348] Nitrogenase subunit NifH (ATPase) |
|---|
| TIGRFAM ID | [TIGR01287] nitrogenase iron protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 85 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCAAAGA AACTGAGACA GCTCGCAATC TACGGCAAGG GCGGCATCGG CAAATCCACC
ACGACCCAGA ATACCGTCGC CGGCTTGGCA TCCCTGGGCA AGAAAATCAT GATCATCGGC
TGCGACCCCA AAGCCGACTC CACCCGCCTG ATGCTGCACG CCAAAGCTCA GGACACCGTC
ATGGACAAAG TCCGCGAGCT GGGCACCGTT GAGGACCTGG AGCTGGAAGA TGTACTTAGA
ACCGGTTACG GCGATGTCAA ATGCGTTGAA TCCGGTGGCC CCGAGCCTGG CGTCGGCTGT
GCCGGCCGCG GTGTTATCAC TGCCATCAAC TTCCTGGAAG AAGAAGGCGC CTACACCCCG
GATCTCGACT TCGTCTTCTA CGACGTTCTC GGCGACGTTG TCTGCGGCGG ATTCGCCATG
CCGATCCGCG AAAACAAGGC CCAGGAAATC TACATCGTCG TTTCCGGCGA AATGATGGCC
ATGTACGCCG CCAACAACAT CTGCAAAGGT ATCGTTAAAT ACGCTTCCTC CGGTAGCGTG
CGCCTCGGCG GTCTGATCTG CAACTCCCGT AACACCGACA AGGAAGCTGA ACTGATCGAA
GCGCTGGCTG CCAAACTCGG TACCCAGATG ATCCACTTCG TGCCCCGCGA CAACCAGGTA
CAGCGTGCCG AACTGCGCCG CATGACGGTT ATCGAGTACT CCCCCGACCA TCCCCAGGCT
AACGAGTACC GTGAACTGGC CCGCAAAATC AGCGAAAACG AAATGCTGGT CGTCCCCACT
CCTCTGACCA TGGACGAACT GGAAGACCTG CTGCTCGAGT TTGGCATTAT CGAAGAAGAC
GACGAAACCA TCATCGGCAA GGCTGAGTCG GCTTCCTAA
|
|---|
| Protein sequence | MAKKLRQLAI YGKGGIGKST TTQNTVAGLA SLGKKIMIIG CDPKADSTRL MLHAKAQDTV
MDKVRELGTV EDLELEDVLR TGYGDVKCVE SGGPEPGVGC AGRGVITAIN FLEEEGAYTP
DLDFVFYDVL GDVVCGGFAM PIRENKAQEI YIVVSGEMMA MYAANNICKG IVKYASSGSV
RLGGLICNSR NTDKEAELIE ALAAKLGTQM IHFVPRDNQV QRAELRRMTV IEYSPDHPQA
NEYRELARKI SENEMLVVPT PLTMDELEDL LLEFGIIEED DETIIGKAES AS
|
|---|
| |