Gene Pcar_2097 details

Gene Information

• Locus tag: Pcar_2097
• Symbol: speA
• ID: 3724788
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pelobacter carbinolicus DSM 2380
• Kingdom: Bacteria
• Replicon accession: NC_007498
• Strand: +
• Start bp: 2445238
• End bp: 2447148
• Gene Length: 1911 bp
• Protein Length: 636 aa
• Translation table: 11
• GC content: 53%
• IMG OID: 637751698
• Product: arginine decarboxylase
• Protein accession: YP_357507
• Protein GI: 77919692
• COG category: [E] Amino acid transport and metabolism
• COG ID: [COG1166] Arginine decarboxylase (spermidine biosynthesis)
• TIGRFAM ID: [TIGR01273] arginine decarboxylase, biosynthetic

Plasmid Coverage information

• Num covering plasmid clones: 56
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAACGCT GGTCAACCAG AGACTCTGCC AAAATATACA ACCTGCCCAA CTGGGGGGAC 
GATTTCTTTT CGATCAATAA AAAAGGACAT ATGTGCGTCC ACCCCTCGCC GAGTTCAAAA 
TATTCCATTG ACTTGCGGGC TCTGGTAGAC GACCTGATCA AGCGCAACAT CAAGCCGCCG 
ATTCTGCTGC GTTTCATGGA TGTTCTGCAG GGACGCATCG CCGCGATCAA CCGCGCCTTC 
AAAAACGCCA TCGCCGAATA CGAATATCCG GCCAGCTATC AGACCTTCTT TCCCATCAAA 
GTCAACCAGC AACGCCAGGT GGTCGAGGCC ATCGCCCATT ACGGCAAGAA ACACCACATG 
GGATTGGAAG TCGGGTCCAA ACCGGAGCTG GTGGCAGCCA TTTCTTTCGC GACCGGCGAA 
AAGCTGCCGA TTATCTGCAA CGGGTACAAG GACAACGATT TCATTGAAAT GGTCCTTTAC 
GCCACGCGTA TCGGTTACGA TATCACCATC GTGGTCGAAA AACTTTTCGA ACTGGAAAAG 
GTCATTGCCC TGTCCAGGCA GTCCGGCATC GTGCCCAAAC TCGGCATCCG CGTGAAGCTT 
TCCTCCAAGG GCACGGGCAA ATGGGCCACC TCCGGCGGCG ATGAAGCCAA ATTCGGCCTC 
AAGATTTCCG AACTGCTGGC CGCGGTGGAG ATCCTCAAAG AACACGACAT GCTCGACACG 
GTAAAATTAC TGCACTTCCA TATCGGCAGC CAGATCACCA AGATCGACAA GATCAAAAAT 
GCCCTTATCG AAGGTACGCG TATCTATGTC GAAATGCGTA AAATGGGGGT AGGACTTGAA 
TATATGGACA TCGGCGGCGG CATGGGAGTC GATTACGACG GTTCCAAGTC GAGTGACTTT 
TCAAGCGCCA ACTACACCAT CGACGAATAC GCCAACGATG TCGTCTATCA GGTCAAAAAT 
ATCTGTGATG AAGCTGGCGT AAGCTGCCCC AATATCATTT CCGAATCGGG CCGCGCCACG 
GTGGCGCATT ATTCGGTGCT GGTGACCAAC ATACTCAACA CCAATACGCA GAACGCTTTG 
CCCGAGTTCG ATGAAATTCT GGAGAATGCC GACGAATTAT CTCCCACGGT GCGTAAGCTG 
GTCGACATCT ACAAAAGCCT CGACCGGCAT TCCCTGCGTG TCGATTACCA CGACACCATT 
CAACTGATTC AGGAAGCGGT TAGCCTTTTC AACCTCGGCT ATCTGAATCT GCACGACCGC 
GCCCTTGCCG AATGGCTGTG CAGCAAGATC TTTATCAAGA TCAGCGGCAT CGTGGAACGG 
CTTAAATCGG TTCCGGACGA GTTTCAGGAA TTTCAGCTGA GTCTGCGCCA GACCTATTTT 
GCGAACTTTT CGCTGTTTCA ATCGCTGCCC GACTCCTGGG CCATCGATCA GCTGTTTCCC 
ATCGTGCCGA TTCAGCGACT CAACGAAAAA CCCGACATCA TGGCTTCCAT CGCCGATATC 
ACCTGCGATT CCGATGGCGA GATCACCAGC TTCGTGGGTG AAAACGGTCG CACCGATTAC 
CTGCCGATCC ACAAAATCGA GGCAGGCGAA GACTACTATG TCGGCTTTTT CCTGATCGGC 
GCCTACCAGG AAATCCTCGG CGACCTGCAC AACCTGTTCG GCGACACCAA CGCTGTGCAC 
GTCTCCTTCA ACCGCAAGAC CAATTACAAG ATCGACACGG TGATCAACGG GGACGCCACC 
TGGGAGAGCC TCAAATACGT CCAGTATAAA GGCCCTGAGA TACTTAAACA TGTGCGCGAC 
ACCCTGGAAA AGGGCGTCGC CTCGCGCAAA ATATCCTTCG AGGAGACCAG TCATTTCCTC 
GAACTGCTCG ACAAAGCGCT CGTCTCATAT ACCTATCTGG GAAGCATCTG A 

 

Protein sequence

MKRWSTRDSA KIYNLPNWGD DFFSINKKGH MCVHPSPSSK YSIDLRALVD DLIKRNIKPP 
ILLRFMDVLQ GRIAAINRAF KNAIAEYEYP ASYQTFFPIK VNQQRQVVEA IAHYGKKHHM 
GLEVGSKPEL VAAISFATGE KLPIICNGYK DNDFIEMVLY ATRIGYDITI VVEKLFELEK 
VIALSRQSGI VPKLGIRVKL SSKGTGKWAT SGGDEAKFGL KISELLAAVE ILKEHDMLDT 
VKLLHFHIGS QITKIDKIKN ALIEGTRIYV EMRKMGVGLE YMDIGGGMGV DYDGSKSSDF 
SSANYTIDEY ANDVVYQVKN ICDEAGVSCP NIISESGRAT VAHYSVLVTN ILNTNTQNAL 
PEFDEILENA DELSPTVRKL VDIYKSLDRH SLRVDYHDTI QLIQEAVSLF NLGYLNLHDR 
ALAEWLCSKI FIKISGIVER LKSVPDEFQE FQLSLRQTYF ANFSLFQSLP DSWAIDQLFP 
IVPIQRLNEK PDIMASIADI TCDSDGEITS FVGENGRTDY LPIHKIEAGE DYYVGFFLIG 
AYQEILGDLH NLFGDTNAVH VSFNRKTNYK IDTVINGDAT WESLKYVQYK GPEILKHVRD 
TLEKGVASRK ISFEETSHFL ELLDKALVSY TYLGSI