Gene Pcar_2088 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPcar_2088 
Symbol 
ID3724779 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePelobacter carbinolicus DSM 2380 
KingdomBacteria 
Replicon accessionNC_007498 
Strand
Start bp2434287 
End bp2434838 
Gene Length552 bp 
Protein Length183 aa 
Translation table11 
GC content54% 
IMG OID637751689 
Producthypothetical protein 
Protein accessionYP_357498 
Protein GI77919683 
COG category[S] Function unknown 
COG ID[COG1720] Uncharacterized conserved protein 
TIGRFAM ID[TIGR00104] probable methyltransferase, YaeB/AF_0241 family 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.0000000000161748 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTGTTATT TTCAGGAGAG CTGTAACCGT TACATCACAA CATATCTATA TCGAAAGAAA 
TCGGAGACCA TCATGGATAT TCGTTTGAGC CCCATCGGTA CCATTCGCAC CCCTTTTTCG
GAAAGACAAG GCACGCCTGT GCAACCTTCC GCCTCTCACG GCACACCGGG GTGTATCGAA
CTCAACGAGG ATCTGATTCC CGGGCTTGCC GATCTGGATG GTTTTTCGCA CCTTATACTG
ATTTATCATT TCGATCGCAG TAACGGCTAC GATCTCGAAG TGACGCCTTT CATGGATACC
CGGCCGCGCG GCCTGTTTTC CACCCGTGCT CCCAAACGCC CCAATCCCAT TGGTCTGTCC
GTCGTCAAGC TGTTACGCGT CGAGGGGGCG GTGCTGCATA TCGAAAATGT CGATGTCCTC
GACGGAACCC CTCTGCTCGA TATCAAGCCC TATGTCCCCC AGTTGGATCA GGCTCCCGAG
GTGCGTATCG GGTGGATGGC CGACAAGCTT GAGCTGGCGA CGGTGGCTAC TGCCGATGAA
CGCTTCAAGT AA
 
Protein sequence
MCYFQESCNR YITTYLYRKK SETIMDIRLS PIGTIRTPFS ERQGTPVQPS ASHGTPGCIE 
LNEDLIPGLA DLDGFSHLIL IYHFDRSNGY DLEVTPFMDT RPRGLFSTRA PKRPNPIGLS
VVKLLRVEGA VLHIENVDVL DGTPLLDIKP YVPQLDQAPE VRIGWMADKL ELATVATADE
RFK