Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pcar_2067 |
Symbol | |
ID | 3724758 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pelobacter carbinolicus DSM 2380 |
Kingdom | Bacteria |
Replicon accession | NC_007498 |
Strand | - |
Start bp | 2407278 |
End bp | 2408075 |
Gene Length | 798 bp |
Protein Length | 265 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 637751668 |
Product | short chain dehydrogenase |
Protein accession | YP_357477 |
Protein GI | 77919662 |
COG category | [R] General function prediction only |
COG ID | [COG4221] Short-chain alcohol dehydrogenase of unknown specificity |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 33 |
Plasmid unclonability p-value | 0.0338341 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCCGGCT TGCCTAATCA CACTCGACCG GATACCAACC AAGGAGAAAA TGCAGTGGGT TACGATATTA ACAACAAGAC GGTCTTCATC ACCGGAGCCA ATCGGGGTAT CGGCAAAGCC ATCGCCGAGG AATTCATAAA ACAGGGAGTT GCCAAGGTCT ATGCTGCCGT GCGCAACGTG GAGAGTGTTG CTCCACTGGT TGCTTTATAC GGAGACAAGG TCGCTCCTAT CAAGGTTGAT GTGGCGGATG AAGAGACGAT CATCGAGGCG GCTAATGCCG CGCAAGACGT GGATGTCGTG ATCAACAATG CCGGTGTTTT AAGCATGTCC TCGGTTTTCG ATGAGGGTGC CATGGAGGCA TTGGCTTTCG AGTTGGATAT CAACCTTTTT GGCCTGATGC GCGTCGCGCG GGCTTTTGCC CCGGTACTGA AAGCCAACGG CGGTGGCGCG TTTGTACAAC TCAATTCGGT GGGGTCTTTG AAAACAGTGC CGAATATCGC TACCTACTGT ACCTCCAAGG CCGCTTGCTA TGCGATTACC CAAGCATTGA GAGAGGCCCT CGTCGCGCAG GGAACCCATG TGGTCAGCGT TCATGCGGGA CCGATCAATA CGGAGATGCT CAATGATACC GGTTACGGAG AGATCGCGGA GCCGCCGTCG CTTGTTGCCA ATGGCATCAT CGAGGCATTA AAGAAAGGTG AATTTCATGT TTTCCCCGAT TCATTGGCCA GGCAGGTCGG TTCCGTTTAT GAAGGTTTTG CGGAGAATGT AATAATGGCT TCGGTGACTG AAGACTGA
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Protein sequence | MAGLPNHTRP DTNQGENAVG YDINNKTVFI TGANRGIGKA IAEEFIKQGV AKVYAAVRNV ESVAPLVALY GDKVAPIKVD VADEETIIEA ANAAQDVDVV INNAGVLSMS SVFDEGAMEA LAFELDINLF GLMRVARAFA PVLKANGGGA FVQLNSVGSL KTVPNIATYC TSKAACYAIT QALREALVAQ GTHVVSVHAG PINTEMLNDT GYGEIAEPPS LVANGIIEAL KKGEFHVFPD SLARQVGSVY EGFAENVIMA SVTED
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