| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcar_2057 |
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| Symbol | |
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| ID | 3724748 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pelobacter carbinolicus DSM 2380 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007498 |
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| Strand | - |
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| Start bp | 2395056 |
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| End bp | 2397560 |
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| Gene Length | 2505 bp |
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| Protein Length | 834 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 637751659 |
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| Product | fimbrial biogenesis protein |
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| Protein accession | YP_357468 |
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| Protein GI | 77919653 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3188] P pilus assembly protein, porin PapC |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.0000165922 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTGGACAA GGCGCAATGT CAGCCATAAA TTGCGGTTTT TTTTTCGCAT TGTCGGCCTG
CCGGGATTTT CGATTCCCAT GTGCTGCATG GTCGTTGTTC TGCTGGTTGC AGCGCAATGT
GCCTGGGTAG ATGCCGCCGC GGCTTCCGCT GAGCAGCTTA TCGTCAGAAT TGTTCTGAAT
CAGGAGCAAA AAGGGGACTT CTTCGTCGCA AAGATGGAAA ATGGCGACTT TCTGGTTGCC
ATCGAAGATC TGGAAGATAT CGGGGTCAGG TTGCCACGCG ACCTGATGGC GAAAGCGGTG
GAAGGATCGC AACTCGCGCT GCGCTCCATA CCCGGTTTGA CGTATCGTTT CGACGAGGCG
ACCTTATCCC TTGAACTGAC GGCGGAACCT GCGCTGCTCG GTAGAAAAAT CATCGACTTT
AAAACAAAGC GCAAAGAGAA GGTCTATTAT CCGCACGATA CCAGCCTGTT TCTCAACTAC
GGCGCAGATT ATCGGGCCGC CGATGGATTC ACCTTTTCCA GCTTCAATTT AACCAGCGAA
GTCGGATTGC GGACCGGTAA AGCGCTGATC CTTTCCGATG CCGTTTTCAT ACGGGATCAA
AATCAGGACA AATTCATACG TTTGCAGACC CGGTACACCC ACGATGACCG AAGCACGCTG
CGACGGTTCA TAGTCGGGGA TTTTTTCGCC TCATCGGGGG AGCTGGGCAG TAGTGTCAAT
GTCGGCGGAC TCAGTCTGCG CAAAGTCTAT CGCATGGATC CCTATTACGT TTATTATCCG
ACCCTCCATT TTTCCGGTCA GACGGCCTTA CCATCCGAAG CAAAAATCTA TCTCAACGAC
ATGCTGATAA AAACGGAAAA GCTCTCCCCG GGGGAGTTCG AGCTGAGAAA CCTCACCCCG
TATGGCGCGG CTGGCAAGGT TGATGTGGTG CTGCGGGATG CCTTCGGAAG GGAGCAGCGC
CTGAACTATC CGTTTTATTA TGCGGATACC GCGCTGCTTA AAGAAGGGTT TCATGAATAC
AGTTATAACC TGGGTTTTAC CCGCGAGGAT TACGGCAGTC GGGGGAATCG CTATGGCAAG
CTTGTTTTCT CCGCCTTTCA TCGCTATGGT GTAAGCGAAT CGCTGACCGT GGGCGTTCAC
GGGGAAGGTA AGAGCGATTT TTTCAATCTG GGGCCGGAGT TGACTTTTAC CATGGCCCGG
GCCGGTATCT GCTCTTTGTC TCTGTCGGGC AGTGTCGATA AGCATTCCGG CAACGGCGGG
GCGGGGATCG CCAGCTACGC TTACCAGGGA TTGCACTTCG GATTTAATCT TTCGCTGGCC
GGCTATACCC GGGATTACAG GAATGTTGCC GATACGCAGA CGGATGACAA GACCAGGTAC
AGTGCCTCTT GCGGAGTAAG TTACGGCAAT CGCTTGCTCG GCACCCTGTC GTTGGATTTT
GCCGCGATCA GGCAATACGC AGGGGATGAC AGGGATCAGG GCTCGGTCAG CTATACCCGC
AGTATTACGT CGCAGGTTTC CGTTTCGACC ACCTACCGGA AGGTCCGGGA AGACGGCGAT
GATGCGGATG AGTTTCTCAT TGCGCTCAAT TTTACGCCAA AGCGCGGTCT TTTCGTTTCG
AGCCGGTACG AGCAGACCCA AGACAGCAAG GATGCCATAC TCTCCGTGCA GAAAAACCCC
CCGGTTGGCG AGGGCCTCAG TTATCGGGCC CGTGTCAAGC GATCCGAAGC CGATAGCGGG
ACGACCTGGC AGGTCAACCC GCACTTGCAA TACAACGGTC GTTACGGCAT CTATGAGGGG
GGCTACGAAG AGCGGATCAC CGAGGACCAA CGGGAGAGTC AGTACCAACT GTCGGTGGCT
GGCGCTCTGG TCTATGTCGG CGGGACTTTT GGCGCGACCC GGCCCGTGTA TGACAGTTTC
GGCCTTGTGC ATGTCGGCGA CGTCGAAGGG GTGAGGATTC GACTCAATTC CGAAGAGGTC
GGAGAGACGG ACGCTTCAGG CAATCTGTTC GTTCCGAACC TGGGGTCGTA CACACAAAAT
CAAATTGGAA TCGAGGCCAG GGATATTCCC ATGGATTACT ATCTCTCCAG GGTCGAGAAA
CTTGTTTCGC CGCCTTTGCG CAGTGGTTCG TGTATCCCGT TTGTGGTCAA GAGGATGCAG
CCGATCTTCG GCCAACTGGC AATACGGGTC AACGGCGAGT TGCGGCCGGT CGAATTTTTG
GAAGTTACCT GCACGGTTAA AGACAGGACC TTTGTTTTTC CTACCGGGTC GGGGGGCGAA
TTCGATATCG ACCTGACTCA GTCGGAGGCT CTCAAAGGGA TATTGGCGTC CGAGGAAACC
GGCTGTTCTT TTGCCTCCGA GTCCGAGAAC AGTTTTCTTG AGCCGGGAAC CTATCAGGCC
GCGATTCGCT ATGAGGGACG CCGGCGGGCG TTTTGTCTGA CCATTCCCGA TACCGACGAC
CCTTTCATCG ATCTTGGGCA AGTGATCATT GAGGAGATGC ATTGA
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| Protein sequence | MWTRRNVSHK LRFFFRIVGL PGFSIPMCCM VVVLLVAAQC AWVDAAAASA EQLIVRIVLN
QEQKGDFFVA KMENGDFLVA IEDLEDIGVR LPRDLMAKAV EGSQLALRSI PGLTYRFDEA
TLSLELTAEP ALLGRKIIDF KTKRKEKVYY PHDTSLFLNY GADYRAADGF TFSSFNLTSE
VGLRTGKALI LSDAVFIRDQ NQDKFIRLQT RYTHDDRSTL RRFIVGDFFA SSGELGSSVN
VGGLSLRKVY RMDPYYVYYP TLHFSGQTAL PSEAKIYLND MLIKTEKLSP GEFELRNLTP
YGAAGKVDVV LRDAFGREQR LNYPFYYADT ALLKEGFHEY SYNLGFTRED YGSRGNRYGK
LVFSAFHRYG VSESLTVGVH GEGKSDFFNL GPELTFTMAR AGICSLSLSG SVDKHSGNGG
AGIASYAYQG LHFGFNLSLA GYTRDYRNVA DTQTDDKTRY SASCGVSYGN RLLGTLSLDF
AAIRQYAGDD RDQGSVSYTR SITSQVSVST TYRKVREDGD DADEFLIALN FTPKRGLFVS
SRYEQTQDSK DAILSVQKNP PVGEGLSYRA RVKRSEADSG TTWQVNPHLQ YNGRYGIYEG
GYEERITEDQ RESQYQLSVA GALVYVGGTF GATRPVYDSF GLVHVGDVEG VRIRLNSEEV
GETDASGNLF VPNLGSYTQN QIGIEARDIP MDYYLSRVEK LVSPPLRSGS CIPFVVKRMQ
PIFGQLAIRV NGELRPVEFL EVTCTVKDRT FVFPTGSGGE FDIDLTQSEA LKGILASEET
GCSFASESEN SFLEPGTYQA AIRYEGRRRA FCLTIPDTDD PFIDLGQVII EEMH
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