Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pcar_2056 |
Symbol | |
ID | 3724747 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pelobacter carbinolicus DSM 2380 |
Kingdom | Bacteria |
Replicon accession | NC_007498 |
Strand | - |
Start bp | 2394528 |
End bp | 2395055 |
Gene Length | 528 bp |
Protein Length | 175 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 637751658 |
Product | putative lipoprotein |
Protein accession | YP_357467 |
Protein GI | 77919652 |
COG category | [S] Function unknown |
COG ID | [COG5430] Uncharacterized secreted protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 33 |
Plasmid unclonability p-value | 0.017923 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAACTCCA GGAAGCGATA TGCCGGAATA AGTCTGCCTG GCTTATTTAT AAGGAGGATG GACGGGATGA AAACCCTGTT GCCTGTTTTG ACCATCATTG TGCTGCTGTT TGCCGTCGAC GCTTATGCGT TTCACTGTGA GGTGACCACC ACGCCCGTCA GTTTCGGTGC CTATGACGTT TTCTCTTCTT TCTCTCTGGA TACGACCGGC AGAATTTCCG TTTCGTGCAA CAATCCCGAA AAAAAACGGA TGCCCGTCAC CATTTCCATC AGTCGAGGCG CAGCGAACAG TTTCTCTCCG AGGCAGATGC GACGGATCGG CGGGAGTGAT CGTATGGATT ACTATCTGTT TGTCGATGCG TCCAGAACGG CCGTCTGGGG CGATGGAACC GGCGGCTCAT CGACCTATGT CGGCATGATC GATCGGACCT CGCCGCTTAA TGTGCCGATC TACGGCCGGA TTCCGGCAAG ACAGAACCTG CGGGCGGGGT CTTATCAGGA CATTCTGGTG GTGACGATTG ATTGGTAA
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Protein sequence | MNSRKRYAGI SLPGLFIRRM DGMKTLLPVL TIIVLLFAVD AYAFHCEVTT TPVSFGAYDV FSSFSLDTTG RISVSCNNPE KKRMPVTISI SRGAANSFSP RQMRRIGGSD RMDYYLFVDA SRTAVWGDGT GGSSTYVGMI DRTSPLNVPI YGRIPARQNL RAGSYQDILV VTIDW
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