Gene Pcar_2053 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPcar_2053 
Symbol 
ID3724744 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePelobacter carbinolicus DSM 2380 
KingdomBacteria 
Replicon accessionNC_007498 
Strand
Start bp2392075 
End bp2392866 
Gene Length792 bp 
Protein Length263 aa 
Translation table11 
GC content57% 
IMG OID637751655 
Producthypothetical protein 
Protein accessionYP_357464 
Protein GI77919649 
COG category[R] General function prediction only 
COG ID[COG1721] Uncharacterized conserved protein (some members contain a von Willebrand factor type A (vWA) domain) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value0.0403432 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTATCTGC TGGTTTCGGC TTTGCTGGGT TTTATGGCCG TATCAGGCTG GTTGGGGCGC 
AGTAATCTGG CCCGGCTGGG AATCGGTCTG CAGTTGCCGG AAGAAATTTA CGACGGCGTC
GAAACCCTGG CCACGTTACG GTTACAAAAT CGACAGCGCT GGTTGCCCGC GTGTCTGCTG
CAACTGTCTT TTGCAGATGC CCAGACCTCC TGTCCTTTGC TGATGCGAGG GGGAAAGACC
AGACTTTCCC TGCCGGTGGT CTTTCACGGG CGCGGTGTTC AGGTTGTACC GGTGGTTAGG
GTGTATTCCA CCTTTCCGAT CAATTTTTTT GTTCGGTCCC TCGATTTTCC CATGACCGCG
GAGGCTCTGG TGTTTCCCCG ACCGAGGTCT TTACGGTGGC CGTCTGTTGC CACGGTGGGC
GGCCTGCAGG GCGATCAGAC CAGCGACCGG GGTTATGAGG GAGATCTGAC CCGCATTGGC
GATTATCGCG GCGGCGAACC CCTTAAAATG ATTCACTGGA AAATTTCGGC CCGGCAGGAT
CAGCTCAAGG TTAAGGAGAT GTCTTCTCTT TCCGCGTCTC CGCTGGTCAT CGAACCATTG
CGTTTACCCG GCCTTAACCT GGAACAACGC CTCGGTGCGG CCTGCTGGCT GGTGAAGACT
TTTTGTCGAC AGGGTCGTAG CGTCGGCTTA AAATTGGACA AACTCTCTAT ACCACCGGCC
TGTGGCCGGC AACACCGACT GCGCCTGCTT GGCGCTCTGG CACGTTATGG TTCCGATACG
TCGTCTGCTT GA
 
Protein sequence
MYLLVSALLG FMAVSGWLGR SNLARLGIGL QLPEEIYDGV ETLATLRLQN RQRWLPACLL 
QLSFADAQTS CPLLMRGGKT RLSLPVVFHG RGVQVVPVVR VYSTFPINFF VRSLDFPMTA
EALVFPRPRS LRWPSVATVG GLQGDQTSDR GYEGDLTRIG DYRGGEPLKM IHWKISARQD
QLKVKEMSSL SASPLVIEPL RLPGLNLEQR LGAACWLVKT FCRQGRSVGL KLDKLSIPPA
CGRQHRLRLL GALARYGSDT SSA