Gene Pcar_2046 details

Gene Information

• Locus tag: Pcar_2046
• Symbol: morA
• ID: 3724737
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pelobacter carbinolicus DSM 2380
• Kingdom: Bacteria
• Replicon accession: NC_007498
• Strand: +
• Start bp: 2380786
• End bp: 2382717
• Gene Length: 1932 bp
• Protein Length: 643 aa
• Translation table: 11
• GC content: 54%
• IMG OID: 637751648
• Product: motility repressor MorA
• Protein accession: YP_357457
• Protein GI: 77919642
• COG category: [T] Signal transduction mechanisms
• COG ID: [COG5001] Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain
• TIGRFAM ID: [TIGR00229] PAS domain S-box; [TIGR00254] diguanylate cyclase (GGDEF) domain

Plasmid Coverage information

• Num covering plasmid clones: 3
• Plasmid unclonability p-value: 0.000000000000887943
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCCGTCAA ATACAAAATC TTTTGCTTTC CGTCTCCGCC ACCATCGCGC AACCCTGCTG 
GTCCTTTCGC CGTTATTTCT CTGCGTGGTG ATGGCACCAA GGTACTATTC GGTGGCCTTA 
ACTGCGGGTT TCACCTTTTT GATTGCAGCT TTTTGCGTTG CCATGGGGCG ATACACGATA 
ACAGCCCAAA AGCTGCATGA AAGCGAAAAA CTGTTTCGTA CCTTCGCTGA CTTTATTTAC 
GACTGGGAGC TATGGATCTC TGCCGAAGGA TCTTTGATCC ACACCTCGCC TGCCTGTGAA 
CGCATCAGCG GTTATGCCAC CACGGCATTC AAAAATGACA GCGATCTATT ACGCAGAATT 
ATTCATCCCG AAGACCTTCA ACGGTATGAT CGATGCGAAA ACGAAGCAAC ACCCGGTTTC 
CGGGAGTTTC GCATGATCAG GCGCGACGGC CAGCTTCGCT GGGTGGAACT GCTCAGTCGG 
CAGCTGCGCA ATGAGGAGGG CAAGGATCTC GGTCGACGCC TGACCATCCG CGATATTACA 
GGCAAAAAAG CAAGGGAACA TGAAATAAGA CAGATCGCCT ACAGCGATGC GTTGACTGGG 
CTACCCAACC GCCTGGCTCT GAAAATGGAC ATGGATAAAG CCTTGGCAAA GGCTTCCCGC 
AATACAGCGA TGGTTGCCGT ATTAATGCTG GATCTGGATG ATTTCAAACA GATCAACGAT 
ACCACCGGAC ATGCCAAGGG CGACGAAATG CTGTTGCTTC TGACCTCGCG CCTGCGGGAA 
CAATTGGGTG AAAAAGACTC TCTTGCACGA CTGGGCGGCG ATGAGTTCGT CGTGGTTCTC 
AACGAGATAG ATAGCGCCAC TTGTGCCGCG AAAAAAACCG AGAAGATCCT CGCCTCCCTG 
AGGGATAATC CCTTCGATCT GGTCGTTGCC AAGGTTTTCG CCTCGGCCAG TATCGGCATC 
GCCTTGTTCC CGCAAAACGG CAGGGACGCT GAAACATTGC TGAAACATGC CGACATGGCC 
ATGTACGAGG CCAAAAATGT CGGGCGCAAT ACCTATCGTT TTTTCAGCGA CGAATTGCAC 
CGCAGAACCA TCGAACGCCA CAAATTGGAG GTGGGACTGC GGCGCGCCGT GAGAAAAAAG 
GAGTTTTTCC TGGTCTATCA GCCCCAGGTG GACCTTGGCA CGGGTCGTAT CGTTGCCCTG 
GAGGCCCTGG TGCGCTGGCA ACACCCTGAA GCCGGAGTCC TGTTGCCAAG CACGTTCATC 
CCGGTAGCGG AGGAAACCGG GCTTATTCAC ATCATGGGCG AATGGATCCT TCGGACCGCT 
TGCCATCAGG CCATGCAGTG GCAACGCATG GGACTGCCGC CCATGCGTAT CGCGGTTAAT 
TTTTCGGCCC GTCAGTTCCG GCAACCCGAC CTGGTGGAAC GCATAGAGCA AATTCTTCTG 
GAATCGGGCC TTCCGCCCCA CCACCTTGAA CTGGAAATCA CGGAAAGCGT GTTCATGGAG 
AACCTTGAAA GCGCCATCGA AACCCTGGTC GATCTCAAAA CACGTGCTAT CCAGATCGCT 
ATAGACGATT TCGGCACGGG CTATTCTTCT CTCAACTACC TGAAGAACTT CCCCCTTGAC 
CGGCTCAAAA TCGCCCAGGA TTTTGTCAGG GACATCCCCG ATGACGAAGA TGATGCGACC 
ATCATTGAAA CCATCATGGC CATGGCAAAC CGCCTGGGGA TCAAGGTGCT TGCCGAAGGG 
GTGGAAACCA TGGAACAAGT GACATTTCTT CGTCGGAAAG GATGTCACGA GATGCAAGGT 
TTTTATTTTG CGCGGCCAAT GCAGGCGGAG GAAATTGCAG GCTTTCTAAA TCAGCGGGGC 
GAGCACGACC TGGCGACTCC GTTGCCAACG GCGGGACCCA CCTTTGGCAA TACGGTGGAT 
CCTGCCTGCT GA 

 

Protein sequence

MPSNTKSFAF RLRHHRATLL VLSPLFLCVV MAPRYYSVAL TAGFTFLIAA FCVAMGRYTI 
TAQKLHESEK LFRTFADFIY DWELWISAEG SLIHTSPACE RISGYATTAF KNDSDLLRRI 
IHPEDLQRYD RCENEATPGF REFRMIRRDG QLRWVELLSR QLRNEEGKDL GRRLTIRDIT 
GKKAREHEIR QIAYSDALTG LPNRLALKMD MDKALAKASR NTAMVAVLML DLDDFKQIND 
TTGHAKGDEM LLLLTSRLRE QLGEKDSLAR LGGDEFVVVL NEIDSATCAA KKTEKILASL 
RDNPFDLVVA KVFASASIGI ALFPQNGRDA ETLLKHADMA MYEAKNVGRN TYRFFSDELH 
RRTIERHKLE VGLRRAVRKK EFFLVYQPQV DLGTGRIVAL EALVRWQHPE AGVLLPSTFI 
PVAEETGLIH IMGEWILRTA CHQAMQWQRM GLPPMRIAVN FSARQFRQPD LVERIEQILL 
ESGLPPHHLE LEITESVFME NLESAIETLV DLKTRAIQIA IDDFGTGYSS LNYLKNFPLD 
RLKIAQDFVR DIPDDEDDAT IIETIMAMAN RLGIKVLAEG VETMEQVTFL RRKGCHEMQG 
FYFARPMQAE EIAGFLNQRG EHDLATPLPT AGPTFGNTVD PAC