| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcar_2038 |
|---|
| Symbol | |
|---|
| ID | 3724729 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pelobacter carbinolicus DSM 2380 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007498 |
|---|
| Strand | - |
|---|
| Start bp | 2368089 |
|---|
| End bp | 2370017 |
|---|
| Gene Length | 1929 bp |
|---|
| Protein Length | 642 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 637751640 |
|---|
| Product | ABC-type transport system, ATPase component |
|---|
| Protein accession | YP_357449 |
|---|
| Protein GI | 77919634 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0488] ATPase components of ABC transporters with duplicated ATPase domains |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 34 |
|---|
| Plasmid unclonability p-value | 0.628193 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCTGCAAC TGCGAAATAT TATAAAGGAT TTTGGGGACA GGCGTCTATT TGCCGGTATC
AACTGGCATA TCCGGCCTGC TGATCGTATT GGCCTTTGCG GAGAGAACGG TACGGGGAAG
ACCACCCTGT TGCGAATTCT TGCCGGAGAG GTGCATCTTG ATGGCGGCGA GCTGCAAACC
GCCCGCCAGA CAACCATCGG CTACTTGCCT CAGGACGGCT TGGTGCATGA CGGGCGAAGC
CTCTTTGAGG AGGTGCGGTC GGCTCTTGCG GACCTTCTCG CCATGGAAGC CGAGTTGCGA
TCCCTGGAGG CTCAGATTGG CGAGGACAGC CCGTCGACTC TGTTGGAACG CTATGCAGAG
GTGCAGGACG TTTTTCGGCA TCGTGGCGGA TATACCATGG AGGCGGAGAT CGGCAGGGTG
CTGGGTGGGC TCGGGTTTGC CGAGAACGAT TGGCAAAAAC CCTGCGAGGA GTTTTCCGGC
GGTTGGCAGA TGCGTATCGC TTTGGCCAAA CTGCTGTTGC AGCGTCCCAA TCTGCTGTTG
CTCGATGAAC CGACCAATCA TCTCGATCTG CCAGCCCGGG ATTGGCTTGA AAATTATCTG
TCCGATTATC CTTTTGCCGT GGTGCTGGTC TCTCACGATC GCTTTTTTCT CGATCGGGTA
GTCAATCGTA TCGTTGAACT GTGGAATGGC GCCTTGACCG AGTATCCGGG TAATTACAGC
GCCTATCTGA CTGCGCGTGA ACAGCGCATT ACGGCCCTGC GGGCGGCGCG GGTGCGTCAG
GATGAAGAAA TTTCCCGCAT CGAGTCTTTT ATCAACCGCT TCCGATATCA GGCCAACAAA
GCGGCCCAGG TACAAAGCCG GATCAAGCAG TTGGAAAAGA TCGAACGTAT CGATGTGCCT
CCCGAGCGCA AAAGCATTGC TTTTAAATTC CCGGCTCCGC CCAAGGGCGG CCGCCAGGCT
ATGGAGTTGG AGGATGTCGA GCACGGATAC GGCACCCTAA GCGTATTGCA GGATGTGTCT
TTGCATATAG AGCGCGGAGA AAGGGTGGCA CTGGTCGGCG CCAACGGGGC CGGCAAGTCG
ACCCTCATGC GTTTGCTGGC AGGGATTGAA GCGCCGCGAA GCGGTTCGCG GCGCGAAGGG
CACAATCTGC ATTTGGCATA TTTTGCCCAG GACCAGGCCA GGGTACTGAA TCCCGAGCAC
ACGGTGTTGG AAGAATTGAC CGCTGCGGCG CCCTTTGACA TGGTGCCGCG GGTGCGGGAT
ATTCTCGGGG CGTTTTTGTT CTCCGGTGAC GACGTGCTCA AATCGGTAGC GGTATTGTCC
GGTGGGGAAC GAAACCGCCT GGCTCTGGCC ATGCTGTTGT TGCGACCGGC CAATCTGCTG
TTGCTCGATG AACCGACCAA TCATCTTGAT CTGCAATCCA AGGACGTGCT GCTACGTTCG
TTGCTGGCTT ACGAAGGAAC CCTGGTTTTC GTGTCGCATG ATCGCTATTT TGTCGATCGC
CTGGCCACGC GGGTTGTCGA AGTTGGCGGC GGTCAGGCTT TGTCGCATCT CGGCAACTAT
GAGGATTTTC TGCGAGCCAA GGCTGCCGAT GGTGACCGCA GTCACTCGGC CGAGCGCGTG
GAACAGCATC AGGCGGCTTC CGCAACCGGA GCTGCCGGGG CCGAGTCGAC TTCCGGAGCT
TCGTATGAAG AACGCAAGGC CGCCAGGCGT GAAGAGCGCC GCAGACAGAA ACAACTGGCG
GAGATCGAAA CGTTGATCGA GACCGGCGAG GAAAATCTTG CTCAATTGGA AGCTCGCCTG
GCCGATCCCG GTCTGTATGA AGACCCCGAG CGTTCCCGGC AGATCGCTGC GGAATACCAG
AGCCTGCAGG ATGAGGTCGG CGTATTGTAC CAACGGTGGG AGTCCCTGCA GCTGGAAGAA
TCGGCCTGA
|
|---|
| Protein sequence | MLQLRNIIKD FGDRRLFAGI NWHIRPADRI GLCGENGTGK TTLLRILAGE VHLDGGELQT
ARQTTIGYLP QDGLVHDGRS LFEEVRSALA DLLAMEAELR SLEAQIGEDS PSTLLERYAE
VQDVFRHRGG YTMEAEIGRV LGGLGFAEND WQKPCEEFSG GWQMRIALAK LLLQRPNLLL
LDEPTNHLDL PARDWLENYL SDYPFAVVLV SHDRFFLDRV VNRIVELWNG ALTEYPGNYS
AYLTAREQRI TALRAARVRQ DEEISRIESF INRFRYQANK AAQVQSRIKQ LEKIERIDVP
PERKSIAFKF PAPPKGGRQA MELEDVEHGY GTLSVLQDVS LHIERGERVA LVGANGAGKS
TLMRLLAGIE APRSGSRREG HNLHLAYFAQ DQARVLNPEH TVLEELTAAA PFDMVPRVRD
ILGAFLFSGD DVLKSVAVLS GGERNRLALA MLLLRPANLL LLDEPTNHLD LQSKDVLLRS
LLAYEGTLVF VSHDRYFVDR LATRVVEVGG GQALSHLGNY EDFLRAKAAD GDRSHSAERV
EQHQAASATG AAGAESTSGA SYEERKAARR EERRRQKQLA EIETLIETGE ENLAQLEARL
ADPGLYEDPE RSRQIAAEYQ SLQDEVGVLY QRWESLQLEE SA
|
|---|
| |