Gene Pcar_2034 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPcar_2034 
Symbol 
ID3724725 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePelobacter carbinolicus DSM 2380 
KingdomBacteria 
Replicon accessionNC_007498 
Strand
Start bp2364162 
End bp2365412 
Gene Length1251 bp 
Protein Length416 aa 
Translation table11 
GC content56% 
IMG OID637751636 
ProductTPR repeat-containing protein 
Protein accessionYP_357445 
Protein GI77919630 
COG category[N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG3063] Tfp pilus assembly protein PilF 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones76 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACGATG AATTTAACGA TTTCCCGTTT TTCCCCGACG AGGAGCGCGA CCTGCCCGAG 
TTGGCTCAAC GCGCCTTGCA ACAGGGGGAA CTGGATCAGG CGTTGGAACT TGGTGAAACC
TGGCTGGAGA GTCACCCCCT CGATGTGGAT GCCATGCACC TGTGTGCCCT GGCGGCCGCC
GGCCTGGGGG ATGAGCTGAA AGCTTTGACG TTGTACCGCA AGGCCTTGCT TCTGGAACCG
GCACATGGCC CTTTGCATCA TAATCTTGGA GCGTTGCTGG AAAAGCGTAA GGATTATCTG
CAGGCCTTGT CTCATTTACG TCGGGCTATG GTATTGCAGC CCGATTTTCC GGAAATTTAT
ATCAATCTGG GCAATGTCCT CGACGCCCTT GGTCAGAGCG AGGAAGCTCT GGCCATGTAC
CGCGAAGCCA TTCGGCGGCA GCCGGAAACG GGCGACGTAT TTTTCAACCA GGGATGTGCG
CTGAACCGTC TGGGCCGCTA TCGCGAGGCG CTGGAGAGTT TCGATGCGGT TTTGCTGCAG
GATCCGGGCA GTGCATCGGC TCTGAATGGC AAGGGGCTGG CTTTGATCGG ATTGGGGTAC
GATGAGGAAG CCATCGCCGC TTTTTCAGCG GCCATTGAAC GCACTCCGGA TTCTACCCTT
TATCGATACA ACCGGGCCTT GGCGCTGCGC GGGCAGCAGC GCTTGCTTGA AGCGTTACAA
GAGCTGGATG AGATATTGAA CGTCGATGCG AACTATATCG ACGCCGTTCT GCAAAAGGCA
GAAGTTCTTC ATCAGCTGGG CCTGGAACAA GAGGGCTGGG CGGCTCTGAA AAAAGCCGAA
GAGTTGGACC CCGAGCATCC GGAAATCCCT TGCTGTCGTG GCCTGTTGCT TAAAAGTCAG
GGGGATTTGA CGGGCGCTTT GCAAGCTGTC GAACAATGTC TTGGCCATTT CCCGGATGAT
CGCAAAGCCC TTGGTCAAAA AGGCTTGATA TTGATGGAAC TGGGTCGCCT GGACGAGGCC
GCATTATGTT TCAATGCCGT TCTCGAACAG GGGGAGAACG CGGACATTGC CTATCGCATG
GCCTGTATCT ATGCGCGTCA GGGGCAGGTT CGGAAGGCGG CCAAATCTCT GGATCAGGCC
GCGGCCCGCG ATCCGGAAAA ATTACGCGCG GCCCAGACCG ATACGGCTTT TGATACGGTG
CGTGAAACAC CATCGTTCAA ACGTCTGTTC AAGAAATTTC ACTTGCTGTA G
 
Protein sequence
MNDEFNDFPF FPDEERDLPE LAQRALQQGE LDQALELGET WLESHPLDVD AMHLCALAAA 
GLGDELKALT LYRKALLLEP AHGPLHHNLG ALLEKRKDYL QALSHLRRAM VLQPDFPEIY
INLGNVLDAL GQSEEALAMY REAIRRQPET GDVFFNQGCA LNRLGRYREA LESFDAVLLQ
DPGSASALNG KGLALIGLGY DEEAIAAFSA AIERTPDSTL YRYNRALALR GQQRLLEALQ
ELDEILNVDA NYIDAVLQKA EVLHQLGLEQ EGWAALKKAE ELDPEHPEIP CCRGLLLKSQ
GDLTGALQAV EQCLGHFPDD RKALGQKGLI LMELGRLDEA ALCFNAVLEQ GENADIAYRM
ACIYARQGQV RKAAKSLDQA AARDPEKLRA AQTDTAFDTV RETPSFKRLF KKFHLL