Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pcar_2034 |
Symbol | |
ID | 3724725 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pelobacter carbinolicus DSM 2380 |
Kingdom | Bacteria |
Replicon accession | NC_007498 |
Strand | - |
Start bp | 2364162 |
End bp | 2365412 |
Gene Length | 1251 bp |
Protein Length | 416 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 637751636 |
Product | TPR repeat-containing protein |
Protein accession | YP_357445 |
Protein GI | 77919630 |
COG category | [N] Cell motility [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG3063] Tfp pilus assembly protein PilF |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 76 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAACGATG AATTTAACGA TTTCCCGTTT TTCCCCGACG AGGAGCGCGA CCTGCCCGAG TTGGCTCAAC GCGCCTTGCA ACAGGGGGAA CTGGATCAGG CGTTGGAACT TGGTGAAACC TGGCTGGAGA GTCACCCCCT CGATGTGGAT GCCATGCACC TGTGTGCCCT GGCGGCCGCC GGCCTGGGGG ATGAGCTGAA AGCTTTGACG TTGTACCGCA AGGCCTTGCT TCTGGAACCG GCACATGGCC CTTTGCATCA TAATCTTGGA GCGTTGCTGG AAAAGCGTAA GGATTATCTG CAGGCCTTGT CTCATTTACG TCGGGCTATG GTATTGCAGC CCGATTTTCC GGAAATTTAT ATCAATCTGG GCAATGTCCT CGACGCCCTT GGTCAGAGCG AGGAAGCTCT GGCCATGTAC CGCGAAGCCA TTCGGCGGCA GCCGGAAACG GGCGACGTAT TTTTCAACCA GGGATGTGCG CTGAACCGTC TGGGCCGCTA TCGCGAGGCG CTGGAGAGTT TCGATGCGGT TTTGCTGCAG GATCCGGGCA GTGCATCGGC TCTGAATGGC AAGGGGCTGG CTTTGATCGG ATTGGGGTAC GATGAGGAAG CCATCGCCGC TTTTTCAGCG GCCATTGAAC GCACTCCGGA TTCTACCCTT TATCGATACA ACCGGGCCTT GGCGCTGCGC GGGCAGCAGC GCTTGCTTGA AGCGTTACAA GAGCTGGATG AGATATTGAA CGTCGATGCG AACTATATCG ACGCCGTTCT GCAAAAGGCA GAAGTTCTTC ATCAGCTGGG CCTGGAACAA GAGGGCTGGG CGGCTCTGAA AAAAGCCGAA GAGTTGGACC CCGAGCATCC GGAAATCCCT TGCTGTCGTG GCCTGTTGCT TAAAAGTCAG GGGGATTTGA CGGGCGCTTT GCAAGCTGTC GAACAATGTC TTGGCCATTT CCCGGATGAT CGCAAAGCCC TTGGTCAAAA AGGCTTGATA TTGATGGAAC TGGGTCGCCT GGACGAGGCC GCATTATGTT TCAATGCCGT TCTCGAACAG GGGGAGAACG CGGACATTGC CTATCGCATG GCCTGTATCT ATGCGCGTCA GGGGCAGGTT CGGAAGGCGG CCAAATCTCT GGATCAGGCC GCGGCCCGCG ATCCGGAAAA ATTACGCGCG GCCCAGACCG ATACGGCTTT TGATACGGTG CGTGAAACAC CATCGTTCAA ACGTCTGTTC AAGAAATTTC ACTTGCTGTA G
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Protein sequence | MNDEFNDFPF FPDEERDLPE LAQRALQQGE LDQALELGET WLESHPLDVD AMHLCALAAA GLGDELKALT LYRKALLLEP AHGPLHHNLG ALLEKRKDYL QALSHLRRAM VLQPDFPEIY INLGNVLDAL GQSEEALAMY REAIRRQPET GDVFFNQGCA LNRLGRYREA LESFDAVLLQ DPGSASALNG KGLALIGLGY DEEAIAAFSA AIERTPDSTL YRYNRALALR GQQRLLEALQ ELDEILNVDA NYIDAVLQKA EVLHQLGLEQ EGWAALKKAE ELDPEHPEIP CCRGLLLKSQ GDLTGALQAV EQCLGHFPDD RKALGQKGLI LMELGRLDEA ALCFNAVLEQ GENADIAYRM ACIYARQGQV RKAAKSLDQA AARDPEKLRA AQTDTAFDTV RETPSFKRLF KKFHLL
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