Gene Pcar_2030 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPcar_2030 
Symbolrph 
ID3724721 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePelobacter carbinolicus DSM 2380 
KingdomBacteria 
Replicon accessionNC_007498 
Strand
Start bp2360574 
End bp2361308 
Gene Length735 bp 
Protein Length244 aa 
Translation table11 
GC content58% 
IMG OID637751632 
Productribonuclease PH 
Protein accessionYP_357441 
Protein GI77919626 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0689] RNase PH 
TIGRFAM ID[TIGR01966] ribonuclease PH 


Plasmid Coverage information

Num covering plasmid clones47 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAGTGATT CCGTAGCCCG GCGCGCCGAT GGCCGTACCC CATCCGAGTT GCGTCCTATA 
TATTTCAGCC GCGGTTTTAC CCGTTATGCC GAAGGTTCGG TATTGGTGTC TTTCGGTGAA
ACCCGCGTTT TATGCAATGC GACCGTTGAA GAGGGCGTAC CGTCCTTTCT TCGCGGCCAG
GGGCAAGGTT GGATCACCGC TGAATATTCC ATGTTGCCTC GCGCAACCCA GGTGCGGTCT
GCACGTGAGG CCACCCGCGG TAAAGTCGGA GGCCGCACCA GTGAAATACA GCGGCTCATC
GGGCGGTCGT TGCGGGCGAT TTGCGACCTC GAAATGCTTG GGGAACGCAC GATTCTCATC
GACTGCGACG TTCTGCAGGC CGATGGAGGC ACGCGTACTG CCGCCATAAC CGGTGCTTAC
GTGGCTCTGC ATGATGCCGT CTATGGCCTC GTGCGTGAAA ACCAACTGTC CGATTCTCCC
TTGCGCGACA GCGTCTCTGC CGTCAGTGTC GGATTGGTGG ACGGACATCC GCTGCTCGAC
CTCGATTATG CCGAAGATTT CCGGGCCGCT GTAGATATGA ATTTCGTCAT CACCGGTTCC
GGGCATTTCG TCGAGGTGCA AGGTACCGCC GAAGAACGCC CTTTCAGCAT GGAAGAGTTG
GACGATCTGC GCAATCTGGC CCTGGCGGGT TGTCGTGATT TGCATCGCTT GCAATTGCGG
GCCCTGGAGG CATAA
 
Protein sequence
MSDSVARRAD GRTPSELRPI YFSRGFTRYA EGSVLVSFGE TRVLCNATVE EGVPSFLRGQ 
GQGWITAEYS MLPRATQVRS AREATRGKVG GRTSEIQRLI GRSLRAICDL EMLGERTILI
DCDVLQADGG TRTAAITGAY VALHDAVYGL VRENQLSDSP LRDSVSAVSV GLVDGHPLLD
LDYAEDFRAA VDMNFVITGS GHFVEVQGTA EERPFSMEEL DDLRNLALAG CRDLHRLQLR
ALEA