Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pcar_2030 |
Symbol | rph |
ID | 3724721 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pelobacter carbinolicus DSM 2380 |
Kingdom | Bacteria |
Replicon accession | NC_007498 |
Strand | - |
Start bp | 2360574 |
End bp | 2361308 |
Gene Length | 735 bp |
Protein Length | 244 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 637751632 |
Product | ribonuclease PH |
Protein accession | YP_357441 |
Protein GI | 77919626 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0689] RNase PH |
TIGRFAM ID | [TIGR01966] ribonuclease PH |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 47 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | GTGAGTGATT CCGTAGCCCG GCGCGCCGAT GGCCGTACCC CATCCGAGTT GCGTCCTATA TATTTCAGCC GCGGTTTTAC CCGTTATGCC GAAGGTTCGG TATTGGTGTC TTTCGGTGAA ACCCGCGTTT TATGCAATGC GACCGTTGAA GAGGGCGTAC CGTCCTTTCT TCGCGGCCAG GGGCAAGGTT GGATCACCGC TGAATATTCC ATGTTGCCTC GCGCAACCCA GGTGCGGTCT GCACGTGAGG CCACCCGCGG TAAAGTCGGA GGCCGCACCA GTGAAATACA GCGGCTCATC GGGCGGTCGT TGCGGGCGAT TTGCGACCTC GAAATGCTTG GGGAACGCAC GATTCTCATC GACTGCGACG TTCTGCAGGC CGATGGAGGC ACGCGTACTG CCGCCATAAC CGGTGCTTAC GTGGCTCTGC ATGATGCCGT CTATGGCCTC GTGCGTGAAA ACCAACTGTC CGATTCTCCC TTGCGCGACA GCGTCTCTGC CGTCAGTGTC GGATTGGTGG ACGGACATCC GCTGCTCGAC CTCGATTATG CCGAAGATTT CCGGGCCGCT GTAGATATGA ATTTCGTCAT CACCGGTTCC GGGCATTTCG TCGAGGTGCA AGGTACCGCC GAAGAACGCC CTTTCAGCAT GGAAGAGTTG GACGATCTGC GCAATCTGGC CCTGGCGGGT TGTCGTGATT TGCATCGCTT GCAATTGCGG GCCCTGGAGG CATAA
|
Protein sequence | MSDSVARRAD GRTPSELRPI YFSRGFTRYA EGSVLVSFGE TRVLCNATVE EGVPSFLRGQ GQGWITAEYS MLPRATQVRS AREATRGKVG GRTSEIQRLI GRSLRAICDL EMLGERTILI DCDVLQADGG TRTAAITGAY VALHDAVYGL VRENQLSDSP LRDSVSAVSV GLVDGHPLLD LDYAEDFRAA VDMNFVITGS GHFVEVQGTA EERPFSMEEL DDLRNLALAG CRDLHRLQLR ALEA
|
| |