| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcar_2029 |
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| Symbol | rdgB |
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| ID | 3724720 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pelobacter carbinolicus DSM 2380 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007498 |
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| Strand | - |
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| Start bp | 2359981 |
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| End bp | 2360571 |
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| Gene Length | 591 bp |
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| Protein Length | 196 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 637751631 |
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| Product | purine NTP pyrophosphatase |
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| Protein accession | YP_357440 |
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| Protein GI | 77919625 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0127] Xanthosine triphosphate pyrophosphatase |
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| TIGRFAM ID | [TIGR00042] non-canonical purine NTP pyrophosphatase, rdgB/HAM1 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 34 |
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| Plasmid unclonability p-value | 0.0306712 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGAGATGC TGGTAGCGAC GCGCAACAAA GGGAAATTGC GGGAAATCGA GCGGTTGCTT
GCCGACACCG ATATCGTCGT CAAGGGGCTT GACGCTTATG GCGATCTTCC CGATGTGGTT
GAGGATGGCG CGACTTTCGC TGCCAATGCG CGTAAAAAAG CCGCGACCAT GGCGCGGCTT
ACCGGCTGTT TGACTGTAGC TGATGATTCC GGCCTGGCGG TTGAGGCCCT TGGCGGAAAG
CCGGGCATCT ACTCTGCCCG TTATGCGGGT GAGGAGGCTT TGGATAGCGA CAATAACCGC
AAGCTTCTCG AAGATATGGC TTCTGTGCCG GAGGGACAGC GACAGGCAGC ATTTCATTGT
GTCATGGCTC TGTGCACGCC GGAGGGCGAT TGCCAATTGT TTGATGGCCG CCTGGATGGC
GTCATTCTGA CCCGGGGCAG GGGCGAGGGT GGCTTCGGTT ACGACCCTCT TTTCCTGGTT
CCCGAATACG GCCGTACCCT TGCCGAGTTG CCTCTCGATA TCAAAAATCG CATAAGTCAC
CGTGGACAGG CCCTTAAGCG TCTTGTCGCC TATTTGCATT CCCCGGGTTG A
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| Protein sequence | MEMLVATRNK GKLREIERLL ADTDIVVKGL DAYGDLPDVV EDGATFAANA RKKAATMARL
TGCLTVADDS GLAVEALGGK PGIYSARYAG EEALDSDNNR KLLEDMASVP EGQRQAAFHC
VMALCTPEGD CQLFDGRLDG VILTRGRGEG GFGYDPLFLV PEYGRTLAEL PLDIKNRISH
RGQALKRLVA YLHSPG
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