Gene Pcar_2028 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPcar_2028 
Symbolblc 
ID3724719 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePelobacter carbinolicus DSM 2380 
KingdomBacteria 
Replicon accessionNC_007498 
Strand
Start bp2359220 
End bp2359774 
Gene Length555 bp 
Protein Length184 aa 
Translation table11 
GC content53% 
IMG OID637751630 
Productouter membrane lipoprotein (lipocalin) 
Protein accessionYP_357439 
Protein GI77919624 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG3040] Bacterial lipocalin 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.0000105317 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCTTGTT CTCTACGTGA AATTTCTGTA GTGGCAATAC GCTGGCTTTC GGCTCTGTTC 
CTGTTGCTGT CTTGCAGTGC CTGCGGCAGG CCGGAGAACG CACCTCGTGC GGTTTCGCGT
ATCGATCTGG CGCGTTATGC TGGGATCTGG TACGAAATTG CCCGTTATCC CAATCGCTTC
GAAAAAAACT GCGCGGGAGC AATGGCGATT TACAGGGTGC TTGATGACGG CGGTCTTGAG
GTGGTGAATC GCTGCCGGGA TATCACTGAC GGCGGTCGCA TTCGCGAGAT TAAAGGTTAC
GCCAAGGTGC CCGATCCGTT GAATCCTGCG GAACTGAAGG TTACCTTTTT CTGGCCGTTT
TATGGCCACT ACTGGATTAT CGCGTTGTCC GAAGATTATA CTTGGGCAGT GGTCGGACAT
CCGCAGCGCA AATACTTATG GATACTGGCG CGCCAACCGG TTCTTGACCA GGGCGTGTTG
CAGAAAATTC TATCGTTGAT CGTTGAGCAG GGGTACGAAC CGGAGCGTCT TGTTTTTGCG
GATCAGGGGA AATAG
 
Protein sequence
MACSLREISV VAIRWLSALF LLLSCSACGR PENAPRAVSR IDLARYAGIW YEIARYPNRF 
EKNCAGAMAI YRVLDDGGLE VVNRCRDITD GGRIREIKGY AKVPDPLNPA ELKVTFFWPF
YGHYWIIALS EDYTWAVVGH PQRKYLWILA RQPVLDQGVL QKILSLIVEQ GYEPERLVFA
DQGK