Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pcar_2028 |
Symbol | blc |
ID | 3724719 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pelobacter carbinolicus DSM 2380 |
Kingdom | Bacteria |
Replicon accession | NC_007498 |
Strand | - |
Start bp | 2359220 |
End bp | 2359774 |
Gene Length | 555 bp |
Protein Length | 184 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 637751630 |
Product | outer membrane lipoprotein (lipocalin) |
Protein accession | YP_357439 |
Protein GI | 77919624 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG3040] Bacterial lipocalin |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.0000105317 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGCTTGTT CTCTACGTGA AATTTCTGTA GTGGCAATAC GCTGGCTTTC GGCTCTGTTC CTGTTGCTGT CTTGCAGTGC CTGCGGCAGG CCGGAGAACG CACCTCGTGC GGTTTCGCGT ATCGATCTGG CGCGTTATGC TGGGATCTGG TACGAAATTG CCCGTTATCC CAATCGCTTC GAAAAAAACT GCGCGGGAGC AATGGCGATT TACAGGGTGC TTGATGACGG CGGTCTTGAG GTGGTGAATC GCTGCCGGGA TATCACTGAC GGCGGTCGCA TTCGCGAGAT TAAAGGTTAC GCCAAGGTGC CCGATCCGTT GAATCCTGCG GAACTGAAGG TTACCTTTTT CTGGCCGTTT TATGGCCACT ACTGGATTAT CGCGTTGTCC GAAGATTATA CTTGGGCAGT GGTCGGACAT CCGCAGCGCA AATACTTATG GATACTGGCG CGCCAACCGG TTCTTGACCA GGGCGTGTTG CAGAAAATTC TATCGTTGAT CGTTGAGCAG GGGTACGAAC CGGAGCGTCT TGTTTTTGCG GATCAGGGGA AATAG
|
Protein sequence | MACSLREISV VAIRWLSALF LLLSCSACGR PENAPRAVSR IDLARYAGIW YEIARYPNRF EKNCAGAMAI YRVLDDGGLE VVNRCRDITD GGRIREIKGY AKVPDPLNPA ELKVTFFWPF YGHYWIIALS EDYTWAVVGH PQRKYLWILA RQPVLDQGVL QKILSLIVEQ GYEPERLVFA DQGK
|
| |