| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcar_2020 |
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| Symbol | |
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| ID | 3724711 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pelobacter carbinolicus DSM 2380 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007498 |
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| Strand | - |
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| Start bp | 2351298 |
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| End bp | 2352029 |
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| Gene Length | 732 bp |
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| Protein Length | 243 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 637751622 |
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| Product | TPR repeat-containing protein |
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| Protein accession | YP_357431 |
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| Protein GI | 77919616 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3063] Tfp pilus assembly protein PilF |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 84 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGCGCTGG CGCTGGTTGT GTCCGGGTGT ACGCCTTCCA GCGGATCCCG TACGAAGGCG
ACGCAAAACG CCAAGGTACA ATACACCCTT GGTGTGGCCG AACTCAAAAA CAATAACCCG
ACCATGGCGC TGGCCAAATT TCTTGAAGCG GAAAAGTTCG ATAAGAACGA TTCCGACATC
CAGGAAGGTC TGGCCCAGGC GTATCAGCGC AAGGGGGCTT TTGCGGAAGC GGAAAAGCAT
TATTTACGGG CCATTGAACT ACGTCCGGAT GAACCGCGGT ATTTCAATAA TCTCGGAGCG
CTCTACCTGG ATATGCAACG GCCCGATGAT GCCCTGCTTC ACCTGAATAA GGCTGCCACC
AATCTGCTGT TCCCTCAACC CGAAATTCCC CTGACCGGTA TCGGAATGGC GTATTTTATG
AAGCAGGAAC ATCAACAGTC CATAGCCTCC TATCGGGAAG CCTTGAGTAA AAATCCGAGG
TATATCGAAG CGTATCTTCG CCTCGGAGAA GTTTTGACCA CTCTTGGCCA GGTCGATCGC
GGGTTGATTG AATATAAGAA AGCTCTGCTG TTGGCTCCAG AATATGGGCG TCTGCATTTT
TATATGGGGA TGGCTTATAT GAAAAATGGC CAGATGGATC CGGCTCGCCA GGCTTTTCTT
AAAGTCCGGG AGTTGATACC TGAATCGGAG ATGGGCATCA GGGCCGGCGA TTATCTTGAC
ATGTTACAGT GA
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| Protein sequence | MALALVVSGC TPSSGSRTKA TQNAKVQYTL GVAELKNNNP TMALAKFLEA EKFDKNDSDI
QEGLAQAYQR KGAFAEAEKH YLRAIELRPD EPRYFNNLGA LYLDMQRPDD ALLHLNKAAT
NLLFPQPEIP LTGIGMAYFM KQEHQQSIAS YREALSKNPR YIEAYLRLGE VLTTLGQVDR
GLIEYKKALL LAPEYGRLHF YMGMAYMKNG QMDPARQAFL KVRELIPESE MGIRAGDYLD
MLQ
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