Gene Pcar_2008 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPcar_2008 
Symbol 
ID3724699 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePelobacter carbinolicus DSM 2380 
KingdomBacteria 
Replicon accessionNC_007498 
Strand
Start bp2339938 
End bp2340699 
Gene Length762 bp 
Protein Length253 aa 
Translation table11 
GC content56% 
IMG OID637751610 
ProductABC-type transport system, ATPase component 
Protein accessionYP_357419 
Protein GI77919604 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1126] ABC-type polar amino acid transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value0.00806638 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTTGCA TGGTGGAGCT GGACAATATC GATAAGGTAC GTATGCGTGA AGACGGTACG 
CGTATGGATG TCCTGCGACA CGTCAGTCTG CGTTTTGCTG CGGCCGGCAT AACTGTTCTG
ATCGGACCCT CGGGGTGCGG TAAAACCACC TTGTTGCGCC TGGTCAACCG GTTGGAGGAT
CCCAGCGCCG GACGCATTCT CGTGAATGGG GTGGATGTGG CCGGGCTCGA CCCACTGCAA
CTGCGGCAGA CAGTGGTTCT GGTTCCGCAA AAGCCTTTTA TGTTCGCCGG ATCCGTGTTG
CAGAACCTGC AACATCCTTT CGTCCTGCGC AAACAAACGC CGCCATCGGC AAATGACCCT
TTATGGATTC AGTCGCTGGC CGGTGTCGAT CTTTCGGATC AGCTCCTGTC GCAGCAGGCG
GCATCCCTTT CATTGGGACA GCAGCAACGG GTCGGGTTGG CAAGAGCGCT TCTTTGCGAT
CCTGAAGTGG TTCTGCTGGA CGAACCGACA AGTGCATTGG ACCGTCCGGC CAGTGATCGT
TTTGCCACAA CCCTCCGCAC TTTATGCCGA CAAAGGCAGA CTTCCTTTGT GGTGGTGACC
CATGATCTGT GGTTTGCGGA GCGCGTGGCC GATCAGGTGG TGTTTCTGTC CGACGGATAT
GTCAAGGAGC TTGGATCGGC AGATCAAATC TTCGGGGCCC CTCAAACAGA GGAACTGCGC
AATTTCTTAA TGTACCCTGC CGCTAAGGGA GACGGGGCAT GA
 
Protein sequence
MSCMVELDNI DKVRMREDGT RMDVLRHVSL RFAAAGITVL IGPSGCGKTT LLRLVNRLED 
PSAGRILVNG VDVAGLDPLQ LRQTVVLVPQ KPFMFAGSVL QNLQHPFVLR KQTPPSANDP
LWIQSLAGVD LSDQLLSQQA ASLSLGQQQR VGLARALLCD PEVVLLDEPT SALDRPASDR
FATTLRTLCR QRQTSFVVVT HDLWFAERVA DQVVFLSDGY VKELGSADQI FGAPQTEELR
NFLMYPAAKG DGA