Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pcar_2008 |
Symbol | |
ID | 3724699 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pelobacter carbinolicus DSM 2380 |
Kingdom | Bacteria |
Replicon accession | NC_007498 |
Strand | - |
Start bp | 2339938 |
End bp | 2340699 |
Gene Length | 762 bp |
Protein Length | 253 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 637751610 |
Product | ABC-type transport system, ATPase component |
Protein accession | YP_357419 |
Protein GI | 77919604 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1126] ABC-type polar amino acid transport system, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 0.00806638 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGTTGCA TGGTGGAGCT GGACAATATC GATAAGGTAC GTATGCGTGA AGACGGTACG CGTATGGATG TCCTGCGACA CGTCAGTCTG CGTTTTGCTG CGGCCGGCAT AACTGTTCTG ATCGGACCCT CGGGGTGCGG TAAAACCACC TTGTTGCGCC TGGTCAACCG GTTGGAGGAT CCCAGCGCCG GACGCATTCT CGTGAATGGG GTGGATGTGG CCGGGCTCGA CCCACTGCAA CTGCGGCAGA CAGTGGTTCT GGTTCCGCAA AAGCCTTTTA TGTTCGCCGG ATCCGTGTTG CAGAACCTGC AACATCCTTT CGTCCTGCGC AAACAAACGC CGCCATCGGC AAATGACCCT TTATGGATTC AGTCGCTGGC CGGTGTCGAT CTTTCGGATC AGCTCCTGTC GCAGCAGGCG GCATCCCTTT CATTGGGACA GCAGCAACGG GTCGGGTTGG CAAGAGCGCT TCTTTGCGAT CCTGAAGTGG TTCTGCTGGA CGAACCGACA AGTGCATTGG ACCGTCCGGC CAGTGATCGT TTTGCCACAA CCCTCCGCAC TTTATGCCGA CAAAGGCAGA CTTCCTTTGT GGTGGTGACC CATGATCTGT GGTTTGCGGA GCGCGTGGCC GATCAGGTGG TGTTTCTGTC CGACGGATAT GTCAAGGAGC TTGGATCGGC AGATCAAATC TTCGGGGCCC CTCAAACAGA GGAACTGCGC AATTTCTTAA TGTACCCTGC CGCTAAGGGA GACGGGGCAT GA
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Protein sequence | MSCMVELDNI DKVRMREDGT RMDVLRHVSL RFAAAGITVL IGPSGCGKTT LLRLVNRLED PSAGRILVNG VDVAGLDPLQ LRQTVVLVPQ KPFMFAGSVL QNLQHPFVLR KQTPPSANDP LWIQSLAGVD LSDQLLSQQA ASLSLGQQQR VGLARALLCD PEVVLLDEPT SALDRPASDR FATTLRTLCR QRQTSFVVVT HDLWFAERVA DQVVFLSDGY VKELGSADQI FGAPQTEELR NFLMYPAAKG DGA
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