Gene Pcar_2002 details

Gene Information

• Locus tag: Pcar_2002
• Symbol: pth
• ID: 3724692
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pelobacter carbinolicus DSM 2380
• Kingdom: Bacteria
• Replicon accession: NC_007498
• Strand: -
• Start bp: 2334090
• End bp: 2334665
• Gene Length: 576 bp
• Protein Length: 191 aa
• Translation table: 11
• GC content: 53%
• IMG OID: 637751603
• Product: peptidyl-tRNA hydrolase
• Protein accession: YP_357413
• Protein GI: 77919598
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0193] Peptidyl-tRNA hydrolase
• TIGRFAM ID: [TIGR00447] peptidyl-tRNA hydrolase

Plasmid Coverage information

• Num covering plasmid clones: 26
• Plasmid unclonability p-value: 0.000950894
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

TTGAAGTTAG TGGTTGGTTT GGGCAACCCG GGTCCCGAAT ATGCTGCAAC GCGGCATAAT 
ATCGGTTTCT TGGTTGCCCA GAAATTTGCG CAGCAAATGG GTGTGTCGCT GAAGCGGCAG 
GCCTACCAGG GGATTGTGGG TACCGGGCGT GCCGATGGGC AGGAGACCAT GGTGCTTCTG 
CCCCAGACTT ATATGAATCG TAGTGGCGTC TCGGTCGTGT CCGCCTGTAA GTCAAAAGGC 
ATCGCTGTCG AGGATGTTGT CGTCATACAC GATGAAATCG ATCTGCCCTT TGGTTCCATA 
CGGATAAAGG TCGGCGGCGG GCATGGCGGA CATAACGGTC TGCGGAGCAT TGTCGATCTG 
CTTGGGTGTC GGGACTTTCT GCGAGTGAGA ATGGGGGTTG GAAGACCGCA GGGGCAAGTC 
GACGTGGCGA AATACGTACT TGGCCAATTC TCTTCTACGG AAAAATCCCA GCTTGACAAC 
GTACTGGAAA ACTCGGTCAA GGCTTTGGAG GTGCTGTTGC AAAAGGGTGC GCAGCAGGCC 
ATGAACGAGT TCAATAACAG GGTGTTTTTA ATTTAA 

 

Protein sequence

MKLVVGLGNP GPEYAATRHN IGFLVAQKFA QQMGVSLKRQ AYQGIVGTGR ADGQETMVLL 
PQTYMNRSGV SVVSACKSKG IAVEDVVVIH DEIDLPFGSI RIKVGGGHGG HNGLRSIVDL 
LGCRDFLRVR MGVGRPQGQV DVAKYVLGQF SSTEKSQLDN VLENSVKALE VLLQKGAQQA 
MNEFNNRVFL I