Gene Pcar_2001 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPcar_2001 
SymbolhppA 
ID3724691 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePelobacter carbinolicus DSM 2380 
KingdomBacteria 
Replicon accessionNC_007498 
Strand
Start bp2332045 
End bp2334069 
Gene Length2025 bp 
Protein Length674 aa 
Translation table11 
GC content57% 
IMG OID637751602 
Productmembrane-bound proton-translocating pyrophosphatase 
Protein accessionYP_357412 
Protein GI77919597 
COG category[C] Energy production and conversion 
COG ID[COG3808] Inorganic pyrophosphatase 
TIGRFAM ID[TIGR01104] vacuolar-type H(+)-translocating pyrophosphatase 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.0591536 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAACTGC AAATGCTTGC TAAGCTTGCA CCGATTCTCG GTGCGGTAGG GTTTGTGATC 
GCCATTGTTA TTTACAATGT GGTCAAGGCG CAGCCTGTCG GCAACGCGCG GATGAAAGAG
ATCTCGGATG CCATTCATTC GGGCGCCATG GCTTTTCTCG GTCGTGAATA CCGGGTTCTG
TCTGTCTTCA TCGTCCTGGT TTTCTTCCTG ATTTTCATGG GCATGGGCAA GCAGACCGCG
TTGGCTTTCG TCGGCGGTGC GATCTGTTCC ATGATCTGCG GTTTTATCGG CATGAAGGCT
GCAACTCGAG CCAACGTGCG TACCACTGAA GCGGCTCGCC AGTCCGGACA GGCCAAAGCA
CTGCTGGTTT CTTTCAACGG CGGCGCTGTT ATGGGGCTGG CCGTTGCTTC TCTCGGCCTG
GTCGGTGTCG GCCTGGCCTT TATTTTCTTT GGTGGCGATG CCGAAACCGC CAAGTACATC
AACGGTTTCG CCATGGGCGC ATCGTCCATC GCGTTGTTTG CCCGCGTGGG TGGCGGTATC
TATACCAAGG CCGCTGACGT TGGTGCCGAC CTGGTGGGTA AGGTTGAAGC CGGTATTCCT
GAGGATGACC CTCGCAACCC CGGTGTTATC GCGGACAACG TCGGTGACTG TGTTGGCGAT
ACGGCCGGTA TGGGTGCGGA TATCTTCGAA TCCTATGTCG GTTCCATTAT AGCTACCATC
GCTATCGCCG CTGCTGCCAG CCCTGCATTG CTCGCAAAAC TTGGCGCCGG TGATAATGTC
CAGGCAAATG CGATGATGTT GCCCCTGGCC ATGGCCACCA TCGGTCTGGT GTTCTCCTTG
ATCGGTATCG GTTCCATGAA ATTCCTGAAG GGGATCAATC CTGCCAAGGC GCTGCACTAT
ACGACCTTTG TCGCTGCAGG TGGCTTCCTG GTTGCGGCTT ATTTCCTAAT CCAGGCTTTC
GGTCTCAACG TCGGTATTTT CTGGGCTATC CTGGCCGGTA CCCTCTCCGG TGTTGCGATT
GGTCAGATCA CCGAGTACTA CACCGCTTCC AGCCCTGTTT CGCGCATCGC TGAAGCCAGT
AAGACCGGTC CTGCCACCAA TATCATTCAC GGTCTGGCTG TTGGCCTGGA AAGCTGCGCC
TTGCCTGTCC TGATCATCTG TCTCTCCATT TTCGTTGCCA ATTATTACGC AGGGCTTTAC
GGCATCGGTA TCGCCGCTGT CGGCATGCTG GCCACGGTCG GTGTTACCAT GACCGTTGAC
GCTTACGGTC CTATCGCCGA CAACGCCGGC GGTATCTCCG AGATGTGCGG GCTTGGTCCG
GATGTGCGTA AGATTACCGA CGGACTGGAC TCCATCGGCA ATACCACTGC TGCTATCGGT
AAGGGTTTTG CCATCGGTTC CGCCGCATTG ACCGCCTTGG CTCTGTTCTC CGCTTACGCC
ACGACTGTCG GTCTTGAGGC TATTAACCTC ATCAATCCTA AAGTTGTGAT CGGATTGCTG
ATCGGCGGCA TGTTGCCTTT CTTTATCGGT GCCCTGACCA TGACCAGTGT CGGGCGTGCT
GCCGGAAAGA TGGTTGACGA GATTCGTCGT CAGTTCCGTG AAATTCCCGG GCTTCTCGAA
GGCAAGCCCA GCGCCAAGCC GGAGCCGGAA AAATGTGTCG ATATCTCGGC ACGTGCCGCT
CTGCGTGAAA TGGTTCTTCC CGGCATGGTT GCCGTTATCG CTCCGGTACT CGTCGGTTTC
GTTATCGGCA AGGAAGCGCT CGGCGGCATG TTGGCCGGTG CCACGCTGGC TGGTGTTTTG
TTGGCCCTGA TGATGTCCAA TGGCGGCGGT GCCTGGGATA ATGCCAAGAA ATATATAGAG
AAGGGCGATC TCGACGGCGA AGCTAAGGGC GGCGATGCGC ACAAGGCTGC CGTTGTCGGC
GATACCGTCG GCGACCCGTT CAAAGATACT TCCGGTCCGG CCATGAACAT TCTCATCAAG
CTGATGAGCG TCGTGTCGCT GGTAATCGCT CCTCTGCTGG GCTGA
 
Protein sequence
MELQMLAKLA PILGAVGFVI AIVIYNVVKA QPVGNARMKE ISDAIHSGAM AFLGREYRVL 
SVFIVLVFFL IFMGMGKQTA LAFVGGAICS MICGFIGMKA ATRANVRTTE AARQSGQAKA
LLVSFNGGAV MGLAVASLGL VGVGLAFIFF GGDAETAKYI NGFAMGASSI ALFARVGGGI
YTKAADVGAD LVGKVEAGIP EDDPRNPGVI ADNVGDCVGD TAGMGADIFE SYVGSIIATI
AIAAAASPAL LAKLGAGDNV QANAMMLPLA MATIGLVFSL IGIGSMKFLK GINPAKALHY
TTFVAAGGFL VAAYFLIQAF GLNVGIFWAI LAGTLSGVAI GQITEYYTAS SPVSRIAEAS
KTGPATNIIH GLAVGLESCA LPVLIICLSI FVANYYAGLY GIGIAAVGML ATVGVTMTVD
AYGPIADNAG GISEMCGLGP DVRKITDGLD SIGNTTAAIG KGFAIGSAAL TALALFSAYA
TTVGLEAINL INPKVVIGLL IGGMLPFFIG ALTMTSVGRA AGKMVDEIRR QFREIPGLLE
GKPSAKPEPE KCVDISARAA LREMVLPGMV AVIAPVLVGF VIGKEALGGM LAGATLAGVL
LALMMSNGGG AWDNAKKYIE KGDLDGEAKG GDAHKAAVVG DTVGDPFKDT SGPAMNILIK
LMSVVSLVIA PLLG