Gene Pcar_1993 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPcar_1993 
Symbol 
ID3724663 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePelobacter carbinolicus DSM 2380 
KingdomBacteria 
Replicon accessionNC_007498 
Strand
Start bp2324453 
End bp2325553 
Gene Length1101 bp 
Protein Length366 aa 
Translation table11 
GC content56% 
IMG OID637751594 
Producttwo component sensor histidine kinase 
Protein accessionYP_357404 
Protein GI77919589 
COG category[T] Signal transduction mechanisms 
COG ID[COG3852] Signal transduction histidine kinase, nitrogen specific 
TIGRFAM ID[TIGR00229] PAS domain S-box 


Plasmid Coverage information

Num covering plasmid clones55 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAACA AAGAACCGAA AGATCGCTCC CTCTACATGA GGGTACTGGA AAATATGGAA 
GAGGCAGTGG TCGCCATCGA CAACGCGGAA CGCATTGTCC TGTTCAATCC TGCGGCTCAG
ATTTGCACCG GATATTCCGA AAGGCAGGCC CTGAAACGCT CCATGGGTGA TCTGTTCGGC
TCCAGCAGCG AATTTCTGCG TCTGGTACGT TCGGCGCTGC AGTCCGGGCG ATCGATCACC
AGCCATGAAG ACCTTCTCTT GCATCGCTCC TCGGCTGCCC CTCTGCCGGT CGGCTTATCC
GCCTCGCCTT TATTTAACCG GGAAGGCGTG CAGGAAGGCG CGGTACTGAT TCTACGGGAT
CACTCCCAGA TCCGCGAACT TGAAGAGACC GTCCGCCAGG CTGACCGTCT GGCCATGCTG
GGCACCCTGG CAGCCGGACT GGCCCACGAG ATCAAAAACC CTTTGGGTGG CATCAAAGGC
GCGGCACAAT TGCTGAATCT CGAACTGCCC CCGGACAACC CCCTGCGCGA ATACACCCGC
GTCATGACCC GGGAGGTGAA CAGGGTCAAC GATCTGATCG AGGAATTGCT CGACTTGACC
CGCCCTCGCC CCACGCAACT GGGCGAAGTC AACCTGTCAC GCATTCTGGC GGATCAGATT
CTGATGCAGA AGCAGGGTCA TCCGGACAAG CAGATCACCT ATCATATGCA ACTGGATCCC
AGTATCCCGC CCATCCGCGG CGATGAAAAC CTGCTCTCCA GATTGTTTCT GAATCTCCTG
AAAAATGCCG CCGAGGCCAT CGAAGGTGAA GGCACGATAA CCGTGACTTC GCGTATTGCA
GGTCAATACC TGTACAACAA ACCCGGCGAA CGTCCGGTGC CGATGGTTAC GGTCGAGATT
CAGGACAACG GGCCAGGCAT CCCGCCGGAT GAACTTGACC GCATATTCAC ACCCTTTTTT
ACCACCAAAA CCAAAGGATG CGGACTGGGA CTGGCTATCT GCCAGAAAAT CATCAACGAA
CACCAAGGTT CCCTGCGTGT ATCCAGCCAG GCAGGTCAGG GCACCTCGTT CACCATATCG
TTGCCATTGA AACGGGGCTA A
 
Protein sequence
MKNKEPKDRS LYMRVLENME EAVVAIDNAE RIVLFNPAAQ ICTGYSERQA LKRSMGDLFG 
SSSEFLRLVR SALQSGRSIT SHEDLLLHRS SAAPLPVGLS ASPLFNREGV QEGAVLILRD
HSQIRELEET VRQADRLAML GTLAAGLAHE IKNPLGGIKG AAQLLNLELP PDNPLREYTR
VMTREVNRVN DLIEELLDLT RPRPTQLGEV NLSRILADQI LMQKQGHPDK QITYHMQLDP
SIPPIRGDEN LLSRLFLNLL KNAAEAIEGE GTITVTSRIA GQYLYNKPGE RPVPMVTVEI
QDNGPGIPPD ELDRIFTPFF TTKTKGCGLG LAICQKIINE HQGSLRVSSQ AGQGTSFTIS
LPLKRG