| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcar_1992 |
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| Symbol | |
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| ID | 3724662 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pelobacter carbinolicus DSM 2380 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007498 |
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| Strand | + |
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| Start bp | 2323418 |
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| End bp | 2324446 |
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| Gene Length | 1029 bp |
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| Protein Length | 342 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 637751593 |
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| Product | dihydrouridine synthase |
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| Protein accession | YP_357403 |
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| Protein GI | 77919588 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0042] tRNA-dihydrouridine synthase |
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| TIGRFAM ID | [TIGR00737] putative TIM-barrel protein, nifR3 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 51 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATTTTTA CTTGCAATCT GCCAGAGTCA TGGTTAAACT GCATAAAAAT TGTGCAAATG
ATTATAAAAT CCCTACATAT AAAACATAAT ATTTTGCTGG CCCCCATGGC CGGCATTACC
GATCTTGCCT GCCGGCTGCT TATGCGACCG TATGGCATAG GACTGGCGTT TACCGAAATG
ATCAGCGCCA ACGGCCTGGT GCTCGGTGGT GACGCAACCA GGGATCTGCT GGCATCCACG
CCGTCGGATC GTCCGCTGGG CATCCAGCTG TTCGGGGAAA ATCCGAAATA CCTCAGCCAG
GCGTGCAAAC AGGTCGAGTC GCATGGAGAT CTTATCGATC TCAACATCGG CTGTCCGGTC
AAAAAGGTCG TCCGCAGCGG TGCCGGCAGT GCCCTGATGC AGACTCCTGC CCGAGTCGCC
CAGATTATCG CGGCCATGCG TCGCGCAACC CATTTGCCCT TGACGGTCAA AATACGCGCC
GGGTGGGATG CGTCGCATAT CAACTTCCTG GAAATCGCGC ACATCGCGGA ACAGGAAGGG
GTTGACGCCA TCACGCTGCA TCCGCGCACC CGCAGCCAGG GTTTCTCCGG CTCGGCGAAC
TGGGATCTGA TCGCCGAACT CAAACGCCGG TCAACGATAC CCGTTATCGG CAGCGGAGAT
ATTTTCGAAG CGCAGTATGC GCAGCGCATG CTGCAACAAA CGGGCTGCGA CGCGGTCATG
ATCGGCCGGG GATGTTACGG TAATCCGTGG CTGGCAAGAG ACATTCTGGC TATGCGGCAA
GGGCAAACGC CGGCGCCGGT CACCCCCGAG GAACGCTGCG ACGTCGCCTT GCGCCATATG
GAGCTTTTCC TTCGTTTCAA CGACGAACGC AAAGCTGTTT TCGATTTACG CAAGCATCTT
TGCTGGTACG CGAAAGGCTT GCCCGGTGCC GCCCAGTTCC GCTCAAGCAT CAATCGTGCG
ATGTCCATCG AGGAAATGCG GACTCTGGTA ATGCACTTTT TTGAACATGC TGCCCACACA
ACGGACTGA
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| Protein sequence | MIFTCNLPES WLNCIKIVQM IIKSLHIKHN ILLAPMAGIT DLACRLLMRP YGIGLAFTEM
ISANGLVLGG DATRDLLAST PSDRPLGIQL FGENPKYLSQ ACKQVESHGD LIDLNIGCPV
KKVVRSGAGS ALMQTPARVA QIIAAMRRAT HLPLTVKIRA GWDASHINFL EIAHIAEQEG
VDAITLHPRT RSQGFSGSAN WDLIAELKRR STIPVIGSGD IFEAQYAQRM LQQTGCDAVM
IGRGCYGNPW LARDILAMRQ GQTPAPVTPE ERCDVALRHM ELFLRFNDER KAVFDLRKHL
CWYAKGLPGA AQFRSSINRA MSIEEMRTLV MHFFEHAAHT TD
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