Gene Pcar_1991 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPcar_1991 
SymbolgltA 
ID3724661 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePelobacter carbinolicus DSM 2380 
KingdomBacteria 
Replicon accessionNC_007498 
Strand
Start bp2321911 
End bp2323215 
Gene Length1305 bp 
Protein Length434 aa 
Translation table11 
GC content55% 
IMG OID637751592 
Producttype I citrate synthase 
Protein accessionYP_357402 
Protein GI77919587 
COG category[C] Energy production and conversion 
COG ID[COG0372] Citrate synthase 
TIGRFAM ID[TIGR01793] citrate (Si)-synthase, eukaryotic 


Plasmid Coverage information

Num covering plasmid clones53 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCTCAAT TAAAAGATAC GTTGTTCCGG AAAATCGAGG AGCAGCGCCC GCGTGTTACC 
CGTTTGCTTA AAGAGTACGG CCAGGTCGAG CTGGACAAGG TTACCATTGC CCAGGCTATC
GGCGGTGTGC GGGGGGTGAA ATGCCTGGTT ACCGATATCT CCTACCTTGA TCCGGAAGAG
GGGGTGCGGT TTCGTGGTAA AACGATACCT GAGACCTTCG CGGCATTGCC CAAGGTCCCC
GGGTCGGAAT ACCCCTATGT CGAAGGTTTC TGGTATTTTC TGTTGACCGG TGAAGTGCCG
ACCATGGAAC AGACTCTCGA GGTGGTTGCG GATTTTCAGG CGCGCAGGCC GGTTCCTCAG
TATGTATTCG ATGCCCTGCG CGCGATGCCC AGGGATTTGC ACCCCATGGC CATGTTGTCC
GCTGCGATTG TGGTTATGCA GGGTGAATCC ATTTTTGCCA AACGGTACAA CGAAGGCATG
GGAAAGGGCG ACCTATGGGA TCCCATGTAT GAGGATTCCT GCAACCTGCT GGCCAAACTG
CCGGCTATCG CCGCTTATAT CTATCGCTTG AAGTACAAGG GCGATACGCC CATCCCGTCC
GACCCCGAAC TCGATTTCGG CGGCGACTTT GCGCATATGA TGGGTATTGC TCCTCCCTAC
GATGATGTGG CCCGGATGTA TTTCATTTTG CATTCCGATC ACGAATCGGG CAATGTTTCG
GCACATACCA CGCGGTTGGT GGCCTCGGCT CTGGCCGATG CCTATTACAG CCTTTCCGCC
GGAGTTAACG GGCTGTCGGG GCCTTTGCAC GGTTTGGCCA ACCAGGAAGT TTTGCGTTGG
ATCCAGAGCA AAATGGAGAA ACTGGGCGGC AAGCTTCCGA CTGAGGAAGA GTTGGAACGC
TACCTGTGGG ATACGCTGAA CAGTGGTCAG GTGATCCCCG GCTACGGCCA TGCGGTTTTG
CGTCGTACCG ATCCGCGGTT CAGCGCGCAG ATGGAGTTCT GCGAAAAGTA CCTGCCCAAT
GATGATCTGT ATCGGCTGGT CAAGATGCTT TACAAGGTGG CGCCCAAGGT CTTGCAGGAA
CATGGCAAGG CGCGGAATCC CTGGCCTAAT GTCGATGCGC AGTCCGGTGT TATTCAGTGG
CACTACGGCA TTACGCAGTA TGAATATTAC ACCGTGTTAT TCGCCGTAGG CCGGGCATTG
GGCGTGTTGG CGAATATTAC CTGGGACCGG GCTCTCGGCT ACCCGCTGGA GCGCCCCAAG
TCCATAACGT TGGATATGAT GGAGAAAACC GCGGGTATTC AGTGA
 
Protein sequence
MSQLKDTLFR KIEEQRPRVT RLLKEYGQVE LDKVTIAQAI GGVRGVKCLV TDISYLDPEE 
GVRFRGKTIP ETFAALPKVP GSEYPYVEGF WYFLLTGEVP TMEQTLEVVA DFQARRPVPQ
YVFDALRAMP RDLHPMAMLS AAIVVMQGES IFAKRYNEGM GKGDLWDPMY EDSCNLLAKL
PAIAAYIYRL KYKGDTPIPS DPELDFGGDF AHMMGIAPPY DDVARMYFIL HSDHESGNVS
AHTTRLVASA LADAYYSLSA GVNGLSGPLH GLANQEVLRW IQSKMEKLGG KLPTEEELER
YLWDTLNSGQ VIPGYGHAVL RRTDPRFSAQ MEFCEKYLPN DDLYRLVKML YKVAPKVLQE
HGKARNPWPN VDAQSGVIQW HYGITQYEYY TVLFAVGRAL GVLANITWDR ALGYPLERPK
SITLDMMEKT AGIQ