Gene Pcar_1978 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPcar_1978 
Symbol 
ID3724687 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePelobacter carbinolicus DSM 2380 
KingdomBacteria 
Replicon accessionNC_007498 
Strand
Start bp2301536 
End bp2302246 
Gene Length711 bp 
Protein Length236 aa 
Translation table11 
GC content55% 
IMG OID637751579 
ProductUDP-2,3-diacylglucosamine hydrolase, putative 
Protein accessionYP_357389 
Protein GI116878568 
COG category[S] Function unknown 
COG ID[COG2908] Uncharacterized protein conserved in bacteria 
TIGRFAM ID[TIGR01854] UDP-2,3-diacylglucosamine hydrolase 


Plasmid Coverage information

Num covering plasmid clones57 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAGATC TTTTTCTAGC CGATACGCAC CTGCTCGATC CCTGCGATGA ACCTTACCTG 
CGCTTGCTGG ATTTTCTGGA TGGGCAATGC GGCAGTCTGC GCAGCCTGGT CATGCTGGGC
GATATTTTCG AATTCTGGCT GGGCTATCGC CATACCGTAT TTTCAGCTTA CCTTCCCCTG
CTCGAAAGGC TGCGGCGCCT GCATGAGGCA GGCACCGAAC TTGTCTTCGT CGAGGGCAAT
CACGATTTTC ATCTGGGGCC CTATTTCAGC GAAACGCTGG ATTGTCGCAT TCTTCCCGAC
GGAGGTGCGT TGGAACGCGA TGGCCGCAAA ATCTTCATAG CCCATGGAGA CCTGGTCAAT
CCGAAAGACA CGGGCTACAG GGTGCTGCGT CGTGTTTTGC GCCATCCTTT GAGCCATCGC
CTGATGATGC TGGTGCCCCC CGATACGGCA TGGCGTATTG CTCGCTGGGC CAGCGCCAAA
AGTTCCCGCA AAAACGGTGG CCGTGAACGG CATTCCCTGC CGCACGACGA CCTGCTAAAC
TATGCCCGGC AACGTTTTTC CGAAGGCTAT GATACCGTGA TCACGGGTCA TTTTCACGTA
CCTTTGCTGC ATCATGAAAA CGGCCACACC CTTATTGCTC TCGGGGATTG GACCAAACAA
CCCTCCTACG CCGTACTGGA AGACGGTGTT TTTACTCTCT ACCCCTCCTG A
 
Protein sequence
MKDLFLADTH LLDPCDEPYL RLLDFLDGQC GSLRSLVMLG DIFEFWLGYR HTVFSAYLPL 
LERLRRLHEA GTELVFVEGN HDFHLGPYFS ETLDCRILPD GGALERDGRK IFIAHGDLVN
PKDTGYRVLR RVLRHPLSHR LMMLVPPDTA WRIARWASAK SSRKNGGRER HSLPHDDLLN
YARQRFSEGY DTVITGHFHV PLLHHENGHT LIALGDWTKQ PSYAVLEDGV FTLYPS