| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcar_1971 |
|---|
| Symbol | birA |
|---|
| ID | 3724680 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pelobacter carbinolicus DSM 2380 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007498 |
|---|
| Strand | - |
|---|
| Start bp | 2293562 |
|---|
| End bp | 2294545 |
|---|
| Gene Length | 984 bp |
|---|
| Protein Length | 327 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 637751572 |
|---|
| Product | biotin-(acetyl-CoA carboxylase) holoenzyme synthetase and biotin operon repressor |
|---|
| Protein accession | YP_357382 |
|---|
| Protein GI | 77919567 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0340] Biotin-(acetyl-CoA carboxylase) ligase |
|---|
| TIGRFAM ID | [TIGR00121] birA, biotin-[acetyl-CoA-carboxylase] ligase region
[TIGR00122] BirA biotin operon repressor domain |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 66 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACCGGGC AGGATGCACG CACAACCATA CTCGCGTTAT TTCGCGCGGC CGGCGACGGA
TTTGTCTCCG GTGCTCAGAT CAGTCGTGCC CTGGGTGTTT CGCGTACCGC CATCTGGAAA
AAGATCGAAC AACTCCGTTT GTTGGGATAT GCGATCGAGG CCGTGCCTTC CAAGGGCTAC
CGCTTGCAGG GCTCGCCCGA TGTCCTGTTG GCTGCGGAGG TGCAGGCGAA CCTGGAAACC
GAGCGCATCG GCTGCGAAGT GATATACTAC GCAGAGACCG ATTCCACGAA CCTGTGTGCC
CACGAACTGG GCAAGGCCGG AGCGCCCGAG GGCAGCGTGG TGTTGGCGGA CAGCCAGATC
GCGGGACGGG GGCGACTCGG CCGTCGATGG TGTTCCCCCC CTGGAGTCAA CCTGTACGCT
TCGGTGCTGT TACGTCCTCC GGTGGCTCCC CGATATGCCA GCCAATTGAC CTTTCTGTCC
GCGGCCGCGG TGGCACGTAC GGTGGCCGAA ACCGGAAACC TTGCGGCGAC GGTCAAATGG
CCCAACGATG TGTTGGTGGG AGGGCGCAAA ATTGCCGGCC TGTTGAACGA GTTGGACGCC
GAAACTGAAC AGATTCACTA TCTGGTATTG GGGATTGGGG TCAATCTCAA CATGCGGACC
GAGCAGTTTC CGGAAGATTT GCGATATCCC GCTACCTCCA TGATGTTGGA ATGCGGCCGC
AAAGTGTCGC GCCTCGATTT CGTTCGCTGT CTGCTGCGTC ATCTCGATCA TCTTTACGCT
CTTTACCTTA GCGAAGGATT CCCTCCGGTG CTGGCCGTTT GGCAGCAATA TTTCGACCTG
GTGGGACGTA GCGTCGAAGT GGACCTTCAG GACCGTCGCA TCATCGGGAA GGTCGCGGGG
CTCGATAGCG ATGGTGCGCT GTTGCTGGAT CTTACGGATG GTACCCGGGA GCGGGTTCTG
GCCGGCGACG TAAAACCGCT GTAG
|
|---|
| Protein sequence | MTGQDARTTI LALFRAAGDG FVSGAQISRA LGVSRTAIWK KIEQLRLLGY AIEAVPSKGY
RLQGSPDVLL AAEVQANLET ERIGCEVIYY AETDSTNLCA HELGKAGAPE GSVVLADSQI
AGRGRLGRRW CSPPGVNLYA SVLLRPPVAP RYASQLTFLS AAAVARTVAE TGNLAATVKW
PNDVLVGGRK IAGLLNELDA ETEQIHYLVL GIGVNLNMRT EQFPEDLRYP ATSMMLECGR
KVSRLDFVRC LLRHLDHLYA LYLSEGFPPV LAVWQQYFDL VGRSVEVDLQ DRRIIGKVAG
LDSDGALLLD LTDGTRERVL AGDVKPL
|
|---|
| |