| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcar_1946 |
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| Symbol | kdsB |
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| ID | 3724636 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pelobacter carbinolicus DSM 2380 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007498 |
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| Strand | - |
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| Start bp | 2259910 |
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| End bp | 2260662 |
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| Gene Length | 753 bp |
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| Protein Length | 250 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 637751547 |
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| Product | 3-deoxy-manno-octulosonate cytidylyltransferase |
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| Protein accession | YP_357357 |
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| Protein GI | 77919542 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1212] CMP-2-keto-3-deoxyoctulosonic acid synthetase |
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| TIGRFAM ID | [TIGR00466] 3-deoxy-D-manno-octulosonate cytidylyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.00000000388198 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGTCGATTA CTGCGGTTAT ACCCGCCCGC TACGCCTCAT CGCGGTTTCC GGGAAAACCT
CTAGCCCGGA TTCTGGGCAA AACCATGATT CAGAGAGTGT ATGAACGTAC CGCGCAGGCG
GCCTGTATCG ACAGGGTGGT TGTGGCGACC GACGACTCTC GCATCGCTGA TGTCGTATCC
GGTTTTGGCG GTGAAGTACA AATGACCCGT GCCGATCATG CCACCGGCAC CGATCGTCTT
GCCGAGGTGA CAGCCAGAAT CGATACGCAG CTGATTGTGA ATGTGCAGGG AGATGAGCCA
CTTATCGATC CGCATATGAT CGAAGCGGCA GTCGCCCCGT TGTCTGAAGA TCCGGCTATT
CCCATGGGGA CGCTCAAAAC TCCCTTGCTG AACTGGCAGG AATACCGGGA TCCCAACGTC
GTTAAAGTGG TGACCGATCG GCGGGGATTC GCTCTGTACT TTTCCCGGGC ACCGATTCCG
CATCCGCGGG AACTGGCTGT TGACGATTCT GCGGTTTCGC CCGCGTCGAT GGGCTTGTTT
CGTCATATCG GCCTGTATGT CTATCGGAAA GACTTTTTAC TGACCTTTGC GGGACTGCCG
GAATCCCCCC TCGAAAGGCT CGAAAAACTC GAACAGCTCA GGGCGCTGGA GAACGGCTAT
GCCATACGGG TGGTGGAGAC AGACCGGGTC AGTCTCGGTG TCGATACTCC CGAAGACCTG
GTCAGAGTCG AAGCTCATCT CCGGGGGCTA TGA
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| Protein sequence | MSITAVIPAR YASSRFPGKP LARILGKTMI QRVYERTAQA ACIDRVVVAT DDSRIADVVS
GFGGEVQMTR ADHATGTDRL AEVTARIDTQ LIVNVQGDEP LIDPHMIEAA VAPLSEDPAI
PMGTLKTPLL NWQEYRDPNV VKVVTDRRGF ALYFSRAPIP HPRELAVDDS AVSPASMGLF
RHIGLYVYRK DFLLTFAGLP ESPLERLEKL EQLRALENGY AIRVVETDRV SLGVDTPEDL
VRVEAHLRGL
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