| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcar_1944 |
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| Symbol | kdsA |
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| ID | 3724634 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pelobacter carbinolicus DSM 2380 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007498 |
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| Strand | - |
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| Start bp | 2257347 |
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| End bp | 2258180 |
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| Gene Length | 834 bp |
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| Protein Length | 277 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 637751545 |
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| Product | 2-dehydro-3-deoxyphosphooctonate aldolase |
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| Protein accession | YP_357355 |
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| Protein GI | 77919540 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG2877] 3-deoxy-D-manno-octulosonic acid (KDO) 8-phosphate synthase |
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| TIGRFAM ID | [TIGR01361] phospho-2-dehydro-3-deoxyheptonate aldolase
[TIGR01362] 3-deoxy-8-phosphooctulonate synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 0.00131131 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCAGACA CATTGAAGGT GGCCGACGTC ACTTTTGGTG GGAATCATCC GGTTGCACTG
ATAGCCGGAC CCTGCGTTAT GGAAAACGAG GCCCATACCC TGGCGATTGC CAGGCAGTTG
CTCGAGGTGA AAAACGAGCT TGGGGTCGGA GTTGTGTTCA AGGCCTCCTT TGATAAGGCC
AACCGGACTT CCGTCAGCGC TTATCGCGGT CCGGGCCTGG AGTCGGGGCT GCGCATTCTG
GACAAGGTAC GGCAGCAGAC AGGTTTGCCC ATTGTCTCGG ATATTCATGA TGTCAGTCAG
GTCGAGGCGG CTGCGGAGGT GCTGGACATT CTCCAGATCC CCGCTTTTTT ATGTCGGCAG
ACCGACTTGT TACTGGCCGC GGGCCGCAGC GGTAAGGTGG TCAATATCAA AAAGGGGCAG
TTTCTGGCCC CCTGGGATAT GGCCAATGCC GTGGCCAAGG TGGCTTCGAC GGGCAACGAT
CGCATCCTGC TGACCGAGCG AGGTACCTCC TTCGGCTACA ATAACCTGGT TGTGGATATG
CGTTCTCTTG CCGTTATGCG AGAACTGGGG TGTCCGGTTG TCTTCGATGC CACCCATGCC
GTGCAGCTGC CCGGCGGGGC CGGAACCTCC TCGGGGGGGC AGCGCCAATT TGTGGCTGCG
CTTTCGCGTG CTGCGGTTGC CGTCGGCGTC GACGGCCTGT TCTGGGAAGT GCATCCGGAT
CCGGATCGCG CCTTGTGCGA CGGCGCCAAC TCCCTGCCGC TCGACCAGGT GAAAAAAACC
CTAAAAGAGA TGATGGCCAT TGATGCCATT GTTAAAGGAA ACACTGAATC GTGA
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| Protein sequence | MPDTLKVADV TFGGNHPVAL IAGPCVMENE AHTLAIARQL LEVKNELGVG VVFKASFDKA
NRTSVSAYRG PGLESGLRIL DKVRQQTGLP IVSDIHDVSQ VEAAAEVLDI LQIPAFLCRQ
TDLLLAAGRS GKVVNIKKGQ FLAPWDMANA VAKVASTGND RILLTERGTS FGYNNLVVDM
RSLAVMRELG CPVVFDATHA VQLPGGAGTS SGGQRQFVAA LSRAAVAVGV DGLFWEVHPD
PDRALCDGAN SLPLDQVKKT LKEMMAIDAI VKGNTES
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