Gene Pcar_1943 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPcar_1943 
Symbol 
ID3724633 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePelobacter carbinolicus DSM 2380 
KingdomBacteria 
Replicon accessionNC_007498 
Strand
Start bp2256379 
End bp2257341 
Gene Length963 bp 
Protein Length320 aa 
Translation table11 
GC content58% 
IMG OID637751544 
Productarabinose-5-phosphate isomerase 
Protein accessionYP_357354 
Protein GI77919539 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0794] Predicted sugar phosphate isomerase involved in capsule formation 
TIGRFAM ID[TIGR00393] KpsF/GutQ family protein 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value0.0150417 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTGGATA CCGCCAGACG GGTTCTCCAG GTTGAAGCCG ATGCCATTGT TGCAATGGCG 
CAGCGACTGG ATGAACGCTT TGTTGCCGCC GTGGAATTGA TTCTGTCCTG CCAGGGACGG
GTGGTGATTA CGGGGATGGG CAAATCCGGG CTGATCTGCC AGAAAATCGC TGCGACCATG
GCTTCAACGG GTACCCCGGC GTTTTTTTTG CATCCCGCCG AAGGGATCCA CGGCGACCTG
GGTATGCTCA TGAAGGGCGA TGTGGTGATC GCTGTGTCCA ATTCCGGCAA TACCGAGGAG
ATCGTACGGA TTCTCCCGGT GATAAAACGG ATGGGGCTGC CGCTGATTGC CATGGCCGGT
CATCCTGAAA GCGCTCTGGC CCGTGCGGCC GATGTGCTTC TGAATGTTGC CGTGCGCGAA
GAGGCCTGCC CGTTGGGGTT GGCGCCCACC GCCAGTACCA CCGCCACCCT GGCCATGGGT
GACGCTCTGG CTGTGGCGTT GCTCGAAAGA CGGGGATTCC GGGAAGAGGA TTTCGCCTTG
TTCCATCCCG GGGGCGCCCT TGGTAAAAAA CTGCTGCTCA CCGTGGAAGA CCTGATGCAT
ACCGGCAGCG ATATTCCCCT GGCATCCCTA ACGACTCCGC TGAAGGATGC TCTTTTCGAA
ATCAGCAGTA AAAAACTGGG CATTACCGGT GTGCTTAACG CAACAGGCGA GTTGGTCGGG
GTGTTTACGG ACGGGGACCT GCGCCGTACT ATGGGCAGGG GCTGCGATGT TCTGGATCTG
CCTTTGGGCG ATGTCATGAG CTGTCACCCC AAGCGCATTC TGCGCTCCAA TCTGGCGGCC
AAGGCCGTGC AGAAGATGGA GGAGTTTTCG ATTACCTCGC TGTTTGTCTT TGATGATGAC
GACAGTACGG TGCCGGTCGG CATCATCCAT CTTCATGATC TGCTCAAAGC GGGGGTGGTC
TGA
 
Protein sequence
MLDTARRVLQ VEADAIVAMA QRLDERFVAA VELILSCQGR VVITGMGKSG LICQKIAATM 
ASTGTPAFFL HPAEGIHGDL GMLMKGDVVI AVSNSGNTEE IVRILPVIKR MGLPLIAMAG
HPESALARAA DVLLNVAVRE EACPLGLAPT ASTTATLAMG DALAVALLER RGFREEDFAL
FHPGGALGKK LLLTVEDLMH TGSDIPLASL TTPLKDALFE ISSKKLGITG VLNATGELVG
VFTDGDLRRT MGRGCDVLDL PLGDVMSCHP KRILRSNLAA KAVQKMEEFS ITSLFVFDDD
DSTVPVGIIH LHDLLKAGVV