Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pcar_1942 |
Symbol | |
ID | 3724632 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pelobacter carbinolicus DSM 2380 |
Kingdom | Bacteria |
Replicon accession | NC_007498 |
Strand | - |
Start bp | 2255849 |
End bp | 2256379 |
Gene Length | 531 bp |
Protein Length | 176 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 637751543 |
Product | putative sugar phosphatase |
Protein accession | YP_357353 |
Protein GI | 77919538 |
COG category | [R] General function prediction only |
COG ID | [COG1778] Low specificity phosphatase (HAD superfamily) |
TIGRFAM ID | [TIGR01662] HAD-superfamily hydrolase, subfamily IIIA [TIGR01670] 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family |
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Plasmid Coverage information |
Num covering plasmid clones | 42 |
Plasmid unclonability p-value | 0.233347 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCAGCAAG CCATGGCAAA AATTCGCCTT TTGTTGCTGG ATGTGGACGG GATCTTGACC GATGGGCGCA TTCAGTACGA TGAGCGTGGC GGTGAGATCA AAAGCTTCGA TGTCAAGGAC GGGCATGGCC TCAAGTTGCT TCAGAGGGCC GGTATCCAGG TCGGCATCAT AACTGGCCGC AGTTCGTCCA TTGTGCAACG GCGCGCCAGC GAATTGGGGA TAGAAATCCT CTACCAGAAT GCCAAGGACA AGCTGCTGCC GTATGGGGAG ATCCTCCGGC TGCATGGCTT TAAAGAGGAC CAGATTGCCT ACATGGGGGA TGATCTGGTG GATCTGCCGA TTTTGATGCG GGTCGGTTTT TCCGCTACGG TTGCCGATGC TGTGACCGAG GTGCAGGAAC GTGTCGATTA TGTCGCCTCC AGGCCCGGGG GGCGAGGCGC GGTGCGTGAG GTGTGTGACA TGTTGTTGAA GCAGGCCGGT GGCTGGGAGG CTGTCACGGA CCGTTATTTC AAAAGCGGGG AGCCGGCGTG A
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Protein sequence | MQQAMAKIRL LLLDVDGILT DGRIQYDERG GEIKSFDVKD GHGLKLLQRA GIQVGIITGR SSSIVQRRAS ELGIEILYQN AKDKLLPYGE ILRLHGFKED QIAYMGDDLV DLPILMRVGF SATVADAVTE VQERVDYVAS RPGGRGAVRE VCDMLLKQAG GWEAVTDRYF KSGEPA
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