Gene Pcar_1934 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPcar_1934 
Symbol 
ID3724624 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePelobacter carbinolicus DSM 2380 
KingdomBacteria 
Replicon accessionNC_007498 
Strand
Start bp2249783 
End bp2250184 
Gene Length402 bp 
Protein Length133 aa 
Translation table11 
GC content53% 
IMG OID637751535 
Productphosphotransferase system, mannose/fructose-specific component IIA 
Protein accessionYP_357345 
Protein GI77919530 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2893] Phosphotransferase system, mannose/fructose-specific component IIA 
TIGRFAM ID[TIGR00824] PTS system, mannose/fructose/sorbose family, IIA component 


Plasmid Coverage information

Num covering plasmid clones48 
Plasmid unclonability p-value0.841781 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGTCGGTT TAGTCGTTGC TACACATTGC AGTTTGGCCG GAGAGCTTGT TAAAACCGCC 
GAGATGATAC TTGGCCCGTT GCCTATGGTC GCGTCTGTCG AGATCCGTCA TGGCCAGGGG
GCTGACGAGA TCCGGCAGGG GTTCAGTCAC GCCATAGACA AGGTGGGAAT AGACGGGGAT
GGGGTTTTGA TCCTGACCGA TATGTTTGGC GGTACACCGT CGAACATCGG ATTCTCTTTT
CTCGAGCAGG GGCTTGTCGA TGTTCTGAGC GGAGTTAATT TACCGATGCT TCTCAGGGCT
TCTCAGGAAC GTTCCGGGCG CACCATGTCG GATCTTGCGG TACTTTTGAG AGATTACGGA
CAGCAAAGTA TTCTGCTGGC CAGCGATATC CTATCCAAAT AG
 
Protein sequence
MVGLVVATHC SLAGELVKTA EMILGPLPMV ASVEIRHGQG ADEIRQGFSH AIDKVGIDGD 
GVLILTDMFG GTPSNIGFSF LEQGLVDVLS GVNLPMLLRA SQERSGRTMS DLAVLLRDYG
QQSILLASDI LSK