| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcar_1894 |
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| Symbol | |
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| ID | 3724584 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pelobacter carbinolicus DSM 2380 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007498 |
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| Strand | - |
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| Start bp | 2208997 |
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| End bp | 2210064 |
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| Gene Length | 1068 bp |
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| Protein Length | 355 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 637751495 |
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| Product | queuine tRNA-ribosyltransferase |
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| Protein accession | YP_357305 |
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| Protein GI | 77919490 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0343] Queuine/archaeosine tRNA-ribosyltransferase |
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| TIGRFAM ID | [TIGR00430] tRNA-guanine transglycosylase, queuosine-34-forming
[TIGR00449] tRNA-guanine transglycosylases, various specificities |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 1.3829100000000001e-18 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATCACTC GGCGAGGCGT GGTCGAAACG CCCGTGTTTA TGCCGGTAGG TACCCAGGGT
ACGGTCAAGG CTATTTTGCC GGAGCAGTTG AAGGAAGAAG GCGCTCAGAT TATACTTGCC
AACACCTATC ACCTGTTTTT GCGGCCAGGC CATGAACGTG TCAGGCGATT AGGCGGCTTG
CACCGTTTCA TGCACTGGGA CGGACCGATT TTGACGGACA GCGGCGGTTT TCAGGTTTTC
AGCCTCGGGA AATTGCGCAA AATAAGCGAA GAAGGTGTAC GTTTTCAGTC CCATCTTGAC
GGCTCCCATC AGATCCTTAC GCCGGAGCTG TCTATCGCCG TGCAGGAGGC TTTGGGGTCA
GATATCATCA TGGTCTTTGA TGAATGTATT CCCTATCCGT CTTCGCGCGA GTATGTCGCC
GAATCTACGG CCCTTTCAAC GCGCTGGGCC GAGCGATCCA AAAAAGCCCG CAGCGCACAG
GACGGTTCAG CCCTGTTCGG TATTGTACAG GGAGGCATGC ATGCCGATCT GCGCCGCCAA
AGTGCCGAGC AGCTCATGGA GATCGGCTTT GACGGCTATG CCCTTGGCGG CCTGTCCGTC
GGCGAAGAAG CCGAGCGTAT GTACGAGATG ATGGATGTGG CCCTGCCGCT GTTGCCTGAC
AACCGGCCGC GTTACGTCAT GGGGGTAGGG ACGCCGGAAA ACCTTATTGA AGGCATTGCC
CGTGGGGTCG ACATGTTCGA TTGCGTCATG CCGACACGCA ATGCCCGCAA CGGAACATTG
TTTACGTCTT TCGGCAAGAT CAGCATCAAA CAGGCGCGTT ACGCCGACGA CGACGGTCCC
ATCGACCCTG ACTGCGGATG CTATGTCTGC CGTCATTATA GCCGTGCCTA TCTGCGGCAC
CTGTTTCAAA GCAACGAGAT CCTGGCTTCG ATGCTCAATA CCCGGCATAA CCTTCACTAC
TATCTGGATT TGATGGCGCA GGCACGTGTT GCCATCGAAG AGGACCGGTT CGAAGCCTTC
CGTGCGGATT TTTACCGACG TAGAAACGAT GGCGGCCTGT CGGTTTGA
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| Protein sequence | MITRRGVVET PVFMPVGTQG TVKAILPEQL KEEGAQIILA NTYHLFLRPG HERVRRLGGL
HRFMHWDGPI LTDSGGFQVF SLGKLRKISE EGVRFQSHLD GSHQILTPEL SIAVQEALGS
DIIMVFDECI PYPSSREYVA ESTALSTRWA ERSKKARSAQ DGSALFGIVQ GGMHADLRRQ
SAEQLMEIGF DGYALGGLSV GEEAERMYEM MDVALPLLPD NRPRYVMGVG TPENLIEGIA
RGVDMFDCVM PTRNARNGTL FTSFGKISIK QARYADDDGP IDPDCGCYVC RHYSRAYLRH
LFQSNEILAS MLNTRHNLHY YLDLMAQARV AIEEDRFEAF RADFYRRRND GGLSV
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