| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcar_1891 |
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| Symbol | secF |
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| ID | 3724581 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pelobacter carbinolicus DSM 2380 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007498 |
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| Strand | - |
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| Start bp | 2205857 |
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| End bp | 2206780 |
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| Gene Length | 924 bp |
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| Protein Length | 307 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 637751492 |
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| Product | preprotein translocase subunit SecF |
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| Protein accession | YP_357302 |
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| Protein GI | 77919487 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0341] Preprotein translocase subunit SecF |
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| TIGRFAM ID | [TIGR00916] protein-export membrane protein, SecD/SecF family
[TIGR00966] protein-export membrane protein SecF |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.000000401903 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGCAGGTTA TCAAGCATGA TATCAATATA AATTTTGTCG GCTGGCGCAA ACTGGCGCTG
ATCTTCTCTC TGGTGCTGAT TGTAGTGGGC ATGGGTTCTC TGGTCGTCAA GGGCGGTCCC
AATTACGGTA TCGATTTTTC CGGGGGAACC CTCATTCAGG TCAAGTTTAC CGAAGCGACC
AAGGCAGCCC AGATCAAGTC CGCTCTTAAG GAGATGGATA TGAAGGGTTT GCTGGTGCAG
AACTTCGAGG GAGATTCCCA TGAATTTCTG CTGCGCGCCC AGGATACCAG TTCCGAGCTC
GAGGGGCTTG CTGATGAGAT TCGCCTTCAC CTGGAAAAAA CCTACGGTGA AGGTACCGTT
GAAATCCGCA GGGTGGAAAT GGTCGGTCCG CAGGTCGGTA AGGATTTGCG CAAAAAAGGT
CTGCTGGCCA TTGTCTTTGC CATGGTCGGC GTCCTGATCT ATATCACCAT TCGTTTCGAG
TTCAAGTTCG CCGTGGGTGC CATCATCGCC CTGCTGCACG ATGTACTTAT CACCCTTGGC
GCGTTTTCCT TGTTCAACAA GGAGATCGAT CTGCCGATCA TCGCCGCTTT TCTGGCCATC
ATCGGTTACT CTCTGAACGA CACCATTATC GTTTACGATC GCATCCGCGA AAACTGCGCG
AAATCGACCA AGGAGGAATT CCCCACCAGG GTCAATGCCA GTATCAACGA AACCCTGTCC
CGGACCATTC TTACCTCCGG AACGACGCTG CTGGTTATCC TGGCCTTGTT CCTGTTTGGT
GGCGGTGTCA TCCACAACTT CGCATTCGCC ATGCTGGTCG GGGTGGTGGT CGGAACCTAT
TCGTCGATTT TTGTTGCCAG CCCCGTGTTG CTGTTCTGGG ATGACTACAA GAATCGCAAG
CAGGCGGCCG TCAAGGCACC TTGA
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| Protein sequence | MQVIKHDINI NFVGWRKLAL IFSLVLIVVG MGSLVVKGGP NYGIDFSGGT LIQVKFTEAT
KAAQIKSALK EMDMKGLLVQ NFEGDSHEFL LRAQDTSSEL EGLADEIRLH LEKTYGEGTV
EIRRVEMVGP QVGKDLRKKG LLAIVFAMVG VLIYITIRFE FKFAVGAIIA LLHDVLITLG
AFSLFNKEID LPIIAAFLAI IGYSLNDTII VYDRIRENCA KSTKEEFPTR VNASINETLS
RTILTSGTTL LVILALFLFG GGVIHNFAFA MLVGVVVGTY SSIFVASPVL LFWDDYKNRK
QAAVKAP
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