| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcar_1883 |
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| Symbol | lytB |
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| ID | 3724573 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pelobacter carbinolicus DSM 2380 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007498 |
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| Strand | - |
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| Start bp | 2197026 |
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| End bp | 2197865 |
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| Gene Length | 840 bp |
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| Protein Length | 279 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 637751484 |
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| Product | 4-hydroxy-3-methylbut-2-enyl diphosphate reductase |
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| Protein accession | YP_357294 |
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| Protein GI | 77919479 |
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| COG category | [I] Lipid transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0761] Penicillin tolerance protein |
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| TIGRFAM ID | [TIGR00216] (E)-4-hydroxy-3-methyl-but-2-enyl pyrophosphate reductase (IPP and DMAPP forming) |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 1.699e-16 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAAGATCA TTCTGGCCGA TAGTGCCGGT TTCTGTTTTG GCGTCAAGCG TGCCACCAAC
CTCGCTTTTG ATGCCGCCGA GCAATTTGAG CACATCTGTT CACTCGGTCC CATTATCCAT
TCGCCGCAGG TAGTCAAAAA GCTGGAGGAA AAAGGGATCA AGGTCATCCG CAAGGTCGAG
GACATCGATC ATGGCGCCGT GATTATTCGC TCCCACGGTA TAACGGCCGA GGAACTCGAC
ATTATTCACG ATCGCGAACT GAAGATTGTG GATGCGACCT GTCCGTTCGT AAAAAAGGCC
CAGGATTATG CCACCATGCT TTGTAACGAA GGCTATTCGG TGGTTCTGGT CGGCGAAAAG
GACCATCCGG AAGTGCAGGG CATTATTTCC TACACGCGGG GCGGTGAAGT GTTTGTCGTA
GCCGATTGCA AGGAAGCCCA GCGTCTGCCC AACAGGCCCA AACTGGGCAT TGTCGCACAG
ACGACCCAGT CGTTTAAGAA TCTTCAGCAA ATAGCGGATA TCTGTCTCGG AAAGAGTAAG
GAAGTTCGTA TATTCAATAC CATATGCGAT GCAACTTCCG TGCGTCAGAA CGAAGCTCGT
AAAATAGCCT GCGAAGCCGA TCTCATGCTG GTTGTGGGTG GTTTCAACAG TGCCAATACC
ACCAGGCTTG CCCAGATCTG CCAGGAAATC CAACCGCGGA CTTTTCATGT CGAAACGGTC
GAGCAGATTC AGGACGGGTG GTTTGAAGGG GTCGAATGCG TCGGTATTAC CGCCGGGGCT
TCCACGCCGC GCTGGATTAT CGATCAGGTC GTCGAGCGGG TCTCCGACAT GTCCAAATAA
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| Protein sequence | MKIILADSAG FCFGVKRATN LAFDAAEQFE HICSLGPIIH SPQVVKKLEE KGIKVIRKVE
DIDHGAVIIR SHGITAEELD IIHDRELKIV DATCPFVKKA QDYATMLCNE GYSVVLVGEK
DHPEVQGIIS YTRGGEVFVV ADCKEAQRLP NRPKLGIVAQ TTQSFKNLQQ IADICLGKSK
EVRIFNTICD ATSVRQNEAR KIACEADLML VVGGFNSANT TRLAQICQEI QPRTFHVETV
EQIQDGWFEG VECVGITAGA STPRWIIDQV VERVSDMSK
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