Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pcar_1881 |
Symbol | sppA |
ID | 3724571 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pelobacter carbinolicus DSM 2380 |
Kingdom | Bacteria |
Replicon accession | NC_007498 |
Strand | - |
Start bp | 2194247 |
End bp | 2195143 |
Gene Length | 897 bp |
Protein Length | 298 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 637751482 |
Product | signal peptide peptidase SppA, 67K type |
Protein accession | YP_357292 |
Protein GI | 77919477 |
COG category | [O] Posttranslational modification, protein turnover, chaperones [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG0616] Periplasmic serine proteases (ClpP class) |
TIGRFAM ID | [TIGR00706] signal peptide peptidase SppA, 36K type |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.0000000971573 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAAAGA GACCTTTTCT GATGGCCCTG TTCACTCTCG GGGCCATCTT TATTTTATTT TTGATCATTA CGCTGCTGCT TTCGCGTTGT ACGGGCAATT TTCAGGGATT GCCTGTTGGC GAACGCATCG GCGTTGTCGA GATCAGCGGC ATGCTGATGG TCTCAGAGCC AACCGTTAAA CAGCTTGTTT CCTTTAAGGA AGATCATTCC ATAAAAGCTG TTATCCTACG CGTTAATTCC CCCGGAGGTG CTGTCGCTCC CTCCCAGGAA ATTCATGATG AAGTTGCAAG GGTCGCTGCC CTGAAACCCG TGGTTGTTTC CATGGCATCG GTCGCCGCCT CCGGCGGCTA CTACGTCAGT ATCCCTGCTC AACGCATTGT CGCCAATCCC GGAACCATCA CCGGTAGCAT TGGGGTCATT ATGCAGACCA CTAACTATCA GGAATTGTAT GATAAGTTGG GTCTTAAAAA TGAGGTTGTC AAAAGCGGCC AGCATAAGGA CCTCGGTTCA CCTTTACGAC CGATGACCCC TGCCGATCGA AAAATACTTC AGGGTGTTAT CGACGATGTT TATGATCAGT TCGTTTCGGC TGTCAGCAAG GGGCGTAAGC TTCCTGTTGA AAAGGTTCGG ACGTTGGCTG ACGGGCGGAT TTTTACCGGC CGGCAAGCCA TGCAGGCAGG TTTGGTCGAC TCTTTGGGTG GTATGCAGGA TGCCGTTGCC ATAGCCTCGG AATTGGCGGG TATAAGTGGC GAACCCAAAC TGGTCTATCC ACCCAAGGAT AAAGAAAGTT TACTGAAATA TTTTATTGAA GAATCCGTTT CTCAGGTTGG CCGAGCTCTG CAACAGCGAC AACAGGGTTC TCCGGCAATG CAATATCTGT GGACGGGCCG TGATTAG
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Protein sequence | MKKRPFLMAL FTLGAIFILF LIITLLLSRC TGNFQGLPVG ERIGVVEISG MLMVSEPTVK QLVSFKEDHS IKAVILRVNS PGGAVAPSQE IHDEVARVAA LKPVVVSMAS VAASGGYYVS IPAQRIVANP GTITGSIGVI MQTTNYQELY DKLGLKNEVV KSGQHKDLGS PLRPMTPADR KILQGVIDDV YDQFVSAVSK GRKLPVEKVR TLADGRIFTG RQAMQAGLVD SLGGMQDAVA IASELAGISG EPKLVYPPKD KESLLKYFIE ESVSQVGRAL QQRQQGSPAM QYLWTGRD
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